RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 OR10K2Q6IF99 312 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 ZNF554Q86TJ5 538 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 RNF152Q8N8N0 203 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 OR2AK2Q8NG84 335 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 OR11H1Q8NG94 326 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 SETD6Q8TBK2 473 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 C4orf3Q8WVX3 66 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 FAAP24Q9BTP7 215 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 TMED9Q9BVK6 235 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 MRPL20Q9BYC9 149 aaKnown RBP13.93□□□□□ -0.18
PCF11-206ENST00000533018 CHMP1AQ9HD42 196 aaPredicted RBP13.93□□□□□ -0.18
PCF11-206ENST00000533018 PARP11Q9NR21 331 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 PLCXD1Q9NUJ7 323 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 ABRACLQ9P1F3 81 aa13.93□□□□□ -0.18
PCF11-206ENST00000533018 YPEL1O60688 119 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 UBBP0CG47 229 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 CNTFRP26992 372 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 PSMB8P28062 276 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 ECI1P42126 302 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 OR3A3P47888 321 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 FAM27D1Q5T7N8 215 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 C6orf201Q7Z4U5 140 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 ODF3L1Q8IXM7 274 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 MS4A15Q8N5U1 240 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 RITA1Q96K30 269 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 YPEL2Q96QA6 119 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 PRR25Q96S07 402 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 SULT4A1Q9BR01 284 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 TMEM59Q9BXS4 323 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 KIAA1456Q9P272 454 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 STEAP1Q9UHE8 339 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 LRRC42Q9Y546 428 aa13.92□□□□□ -0.18
PCF11-206ENST00000533018 SAA2-SAA4A0A096LPE2 208 aa13.91□□□□□ -0.18
PCF11-206ENST00000533018 PTGES3LE9PB15 166 aa13.91□□□□□ -0.18
PCF11-206ENST00000533018 G3V318 75 aa13.91□□□□□ -0.18
PCF11-206ENST00000533018 NBR2O15453 112 aa13.91□□□□□ -0.18
PCF11-206ENST00000533018 SAA2P0DJI9 122 aaPredicted RBP13.91□□□□□ -0.18
PCF11-206ENST00000533018 VSIG8P0DPA2 414 aa13.91□□□□□ -0.18
PCF11-206ENST00000533018 ZNF260Q3ZCT1 412 aa13.91□□□□□ -0.18
PCF11-206ENST00000533018 OR5B12Q96R08 314 aa13.91□□□□□ -0.18
PCF11-206ENST00000533018 NABP2Q9BQ15 211 aa13.91□□□□□ -0.18
PCF11-206ENST00000533018 CHCHD6Q9BRQ6 235 aa13.91□□□□□ -0.18
PCF11-206ENST00000533018 MND1Q9BWT6 205 aa13.91□□□□□ -0.18
PCF11-206ENST00000533018 ANKRD60Q9BZ19 345 aa13.91□□□□□ -0.18
PCF11-206ENST00000533018 OR51J1Q9H342 316 aa13.91□□□□□ -0.18
PCF11-206ENST00000533018 ATP6V0E1O15342 81 aa13.9□□□□□ -0.18
PCF11-206ENST00000533018 CHATP28329 748 aa13.9□□□□□ -0.18
PCF11-206ENST00000533018 RPS27AP62979 156 aaKnown RBP13.9□□□□□ -0.18
PCF11-206ENST00000533018 LIN54Q6MZP7 749 aa13.9□□□□□ -0.18
PCF11-206ENST00000533018 ZNF833PQ6ZTB9 187 aa13.9□□□□□ -0.18
PCF11-206ENST00000533018 CEACAM19Q7Z692 300 aa13.9□□□□□ -0.18
PCF11-206ENST00000533018 KCNG3Q8TAE7 436 aa13.9□□□□□ -0.18
PCF11-206ENST00000533018 WWC2-AS2Q96NR7 200 aa13.9□□□□□ -0.18
PCF11-206ENST00000533018 KLK15Q9H2R5 256 aa13.9□□□□□ -0.18
PCF11-206ENST00000533018 VCXQ9H320 206 aa13.9□□□□□ -0.18
PCF11-206ENST00000533018 VSIG4Q9Y279 399 aa13.9□□□□□ -0.18
PCF11-206ENST00000533018 TRAV41A0A0B4J266 112 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 ST8SIA5O15466 376 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 SRMP19623 302 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 HTR2CP28335 458 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 BLVRBP30043 206 aaPredicted RBP13.89□□□□□ -0.19
PCF11-206ENST00000533018 PLGLAQ15195 96 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 MED22Q15528 200 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 HMGN3Q15651 99 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 C5orf64Q2M2E5 130 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 C6orf141Q5SZD1 244 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 OGFRL1Q5TC84 451 aaPredicted RBP13.89□□□□□ -0.19
PCF11-206ENST00000533018 LRRTM1Q86UE6 522 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 OR1N2Q8NGR9 330 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 FBLIM1Q8WUP2 373 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 UBE2E2Q96LR5 201 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 NICN1Q9BSH3 213 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 KCNK15Q9H427 330 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 PLEKHJ1Q9NW61 149 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 FKBP14Q9NWM8 211 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 ZNF580Q9UK33 172 aa13.89□□□□□ -0.19
PCF11-206ENST00000533018 IGHV7-81A0A0B4J1V7 117 aa13.88□□□□□ -0.19
PCF11-206ENST00000533018 LY86O95711 162 aa13.88□□□□□ -0.19
PCF11-206ENST00000533018 HLA-DRB1P01911 266 aa13.88□□□□□ -0.19
PCF11-206ENST00000533018 CDK1P06493 297 aa13.88□□□□□ -0.19
PCF11-206ENST00000533018 OR8U8P0C7N1 319 aa13.88□□□□□ -0.19
PCF11-206ENST00000533018 PPIFP30405 207 aaKnown RBP13.88□□□□□ -0.19
PCF11-206ENST00000533018 SPHARQ15513 63 aa13.88□□□□□ -0.19
PCF11-206ENST00000533018 HSD17B12Q53GQ0 312 aa13.88□□□□□ -0.19
PCF11-206ENST00000533018 FAM131AQ6UXB0 335 aa13.88□□□□□ -0.19
PCF11-206ENST00000533018 ZNF491Q8N8L2 437 aa13.88□□□□□ -0.19
PCF11-206ENST00000533018 ABHD5Q8WTS1 349 aa13.88□□□□□ -0.19
PCF11-206ENST00000533018 GNB4Q9HAV0 340 aa13.88□□□□□ -0.19
PCF11-206ENST00000533018 PIPOXQ9P0Z9 390 aa13.88□□□□□ -0.19
PCF11-206ENST00000533018 SORL1Q92673 2214 aa13.88□□□□□ -0.19
PCF11-206ENST00000533018 RYR3Q15413 4870 aa13.87□□□□□ -0.19
PCF11-206ENST00000533018 RAB29O14966 203 aa13.87□□□□□ -0.19
PCF11-206ENST00000533018 GSTP1P09211 210 aaKnown RBP13.87□□□□□ -0.19
PCF11-206ENST00000533018 NHLRC4P0CG21 123 aaPredicted RBP13.87□□□□□ -0.19
PCF11-206ENST00000533018 RAB9AP51151 201 aa13.87□□□□□ -0.19
PCF11-206ENST00000533018 UNC119Q13432 240 aa13.87□□□□□ -0.19
PCF11-206ENST00000533018 FHL3Q13643 280 aa13.87□□□□□ -0.19
PCF11-206ENST00000533018 ECSCRQ19T08 205 aa13.87□□□□□ -0.19
PCF11-206ENST00000533018 RPL39P5Q59GN2 51 aa13.87□□□□□ -0.19
PCF11-206ENST00000533018 LY6G6FQ5SQ64 297 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms