RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 IFI27L2Q9H2X8 130 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 MAP1LC3AQ9H492 121 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 MRPS18AQ9NVS2 196 aaKnown RBP6.45□□□□□ -1.38
HDAC3-216ENST00000523088 TMEM242Q9NWH2 141 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 JKAMPQ9P055 326 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF319Q9P2F9 582 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 ST6GALNAC2Q9UJ37 374 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 SH2B3Q9UQQ2 575 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 FER1L5A0AVI2 2057 aa6.45□□□□□ -1.38
HDAC3-216ENST00000523088 NBASA2RRP1 2371 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF816-ZNF321PA0A0X1KG74 233 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 NAP1L6A6NFF2 107 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 B4DEV8 164 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 TMEM150CB9EJG8 249 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 G3V2L1 256 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 J3KT08 172 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 GABRPO00591 440 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 MLNRO43193 412 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 ALOX12BO75342 701 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 MMP7P09237 267 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-216ENST00000523088 AKAIN1P0CW23 69 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 MALP21145 153 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 CCL11P51671 97 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 PPP1CAP62136 330 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 PSG4Q00888 419 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 ACSM2AQ08AH3 577 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 OTPQ5XKR4 325 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 OLFML2AQ68BL7 652 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 ACSM2BQ68CK6 577 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 UFSP1Q6NVU6 142 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 GPSM1Q86YR5 675 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 PIANPQ8IYJ0 282 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 CLDN19Q8N6F1 224 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 OR11G2Q8NGC1 345 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 OR52E2Q8NGJ4 325 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 BLNKQ8WV28 456 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 BAALCQ8WXS3 180 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 SLAMF6Q96DU3 332 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 NDC1Q9BTX1 674 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 LIN7CQ9NUP9 197 aaKnown RBP6.44□□□□□ -1.38
HDAC3-216ENST00000523088 NTMQ9P121 344 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 HEATR5BQ9P2D3 2071 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 MED13Q9UHV7 2174 aa6.44□□□□□ -1.38
HDAC3-216ENST00000523088 TRBV9A0A0B4J1U6 114 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 IGLC7A0M8Q6 106 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 BBIP1A8MTZ0 92 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 FAM157AC9JC47 383 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 H3BQ15 152 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 CDC42EP2O14613 210 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 TRAPPC6AO75865 159 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 MOSP00540 346 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 CT45A6P0DMU7 189 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 CT45A5P0DMU8 189 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 CT45A10P0DMU9 189 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 CT45A7P0DMV0 189 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 SLC25A4P12235 298 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 GATA3P23771 443 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 HNRNPA3P51991 378 aaKnown RBP6.43□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF133P52736 654 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-216ENST00000523088 UBE2NP61088 152 aaKnown RBP6.43□□□□□ -1.38
HDAC3-216ENST00000523088 OC90Q02509 493 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-216ENST00000523088 AKR1C1Q04828 323 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 MMDQ15546 238 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 LRRC75BQ2VPJ9 315 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 CT45A1Q5HYN5 189 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 ACTL10Q5JWF8 245 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 GFI1BQ5VTD9 330 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 MRPL54Q6P161 138 aaKnown RBP6.43□□□□□ -1.38
HDAC3-216ENST00000523088 Q6ZSR9 355 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF440Q8IYI8 595 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 TTC9CQ8N5M4 171 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 PTGR2Q8N8N7 351 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-216ENST00000523088 RELL2Q8NC24 303 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-216ENST00000523088 OR2T12Q8NG77 320 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 OR5AR1Q8NGP9 310 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 CT45A3Q8NHU0 189 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 SGK494Q96LW2 274 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 JMJD8Q96S16 334 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 ATF6BQ99941 703 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 VAMP8Q9BV40 100 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 ZNF471Q9BX82 626 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-216ENST00000523088 SPANXDQ9BXN6 97 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 SMIM3Q9BZL3 60 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 DPY30Q9C005 99 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 POLR2J3Q9H1A7 115 aaKnown RBP6.43□□□□□ -1.38
HDAC3-216ENST00000523088 OR51I2Q9H344 312 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 SLC52A3Q9NQ40 469 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 PTPN13Q12923 2485 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 DOPEY2Q9Y3R5 2298 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 ESPL1Q14674 2120 aa6.43□□□□□ -1.38
HDAC3-216ENST00000523088 UBR5O95071 2799 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-216ENST00000523088 CCDC88CQ9P219 2028 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 MDC1Q14676 2089 aaKnown RBP6.42□□□□□ -1.38
HDAC3-216ENST00000523088 A0A087X0K7 114 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 A0A1B0GW64 132 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 F5H5K5 113 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 MS4A18H0YCH9 400 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 J3KTA2 159 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 K7EN84 100 aa6.42□□□□□ -1.38
HDAC3-216ENST00000523088 SAP18O00422 153 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms