RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 LMO1P25800 156 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 RAC1P63000 192 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 HERPUD1Q15011 391 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 WIPI1Q5MNZ9 446 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 GUSBP11Q6P575 273 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 KMT5CQ86Y97 462 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 SLC25A45Q8N413 288 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 ABHD3Q8WU67 409 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 TMEM204Q9BSN7 226 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 WNT5BQ9H1J7 359 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 ZDHHC11Q9H8X9 412 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 ATP23Q9Y6H3 246 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 CPAMD8Q8IZJ3 1885 aa10.96□□□□□ -0.66
TRAPPC9-208ENST00000520857 GRIFINA4D1Z8 144 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 GNB2P62879 340 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 PRSS8Q16651 343 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 Q6ZPA2 131 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 SYT13Q7L8C5 426 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 ZIC4Q8N9L1 334 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 OR51G1Q8NGK1 321 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 CPT1CQ8TCG5 803 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 NEIL1Q96FI4 390 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 LIFP15018 202 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 COX5AP20674 150 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 GDF1P27539 372 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 BAGE3Q86Y29 109 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 BAGE2Q86Y30 109 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 OR10P1Q8NGE3 313 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 RYDENQ9NUL5 291 aaKnown RBP10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 CLN8Q9UBY8 286 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 MDFIC2A0A1B0GVS7 189 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 A6NNC1 897 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 ANKRD30BLA7E2S9 258 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 C11orf94C9JXX5 98 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 MKRN2OSH3BPM6 223 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 CCKARP32238 428 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 PLP2Q04941 152 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 SPATA46Q5T0L3 261 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 ACY3Q96HD9 319 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 SNHG12Q9BXW3 62 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 WDR61Q9GZS3 305 aaKnown RBP10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 DOCK10Q96BY6 2186 aa10.95□□□□□ -0.66
TRAPPC9-208ENST00000520857 TRANK1O15050 2925 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 TRAV1-1A0A0B4J248 108 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 RPP25LQ8N5L8 163 aaKnown RBP10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 FAM103A1Q9BTL3 118 aaKnown RBP10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 NAGKQ9UJ70 344 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 PIGBOS1A0A0B4J2F0 54 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 C1QTNF9BB2RNN3 333 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 OTX2P32243 289 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 RAC3P60763 192 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 FGF12P61328 243 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 TEX38Q6PEX7 206 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 BTNL3Q6UXE8 466 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 ODF3L1Q8IXM7 274 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 OR10D3Q8NH80 312 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 CDH20Q9HBT6 801 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 TMEM9BQ9NQ34 198 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 ZNF391Q9UJN7 358 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 RNF115Q9Y4L5 304 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 PFN1P07737 140 aaKnown RBP10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 HOXA6P31267 233 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 MPLP40238 635 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 ARF1P84077 181 aaKnown RBP10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 IGFBP7Q16270 282 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 LRRC75BQ2VPJ9 315 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 MBD3L1Q8WWY6 194 aa10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 LIN7CQ9NUP9 197 aaKnown RBP10.94□□□□□ -0.66
TRAPPC9-208ENST00000520857 IGKV1-6A0A0C4DH72 117 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 CBR3O75828 277 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 KITLGP21583 273 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 EDDM3BP56851 147 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 HIST1H3AP68431 136 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 CCL7P80098 99 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 TGFBR3Q03167 851 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 MSMO1Q15800 293 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 SLC23A3Q6PIS1 610 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 PLPPR1Q8TBJ4 325 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 TMEM170AQ8WVE7 144 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 TMEM68Q96MH6 324 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 MTCH1Q9NZJ7 389 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 GOLT1BQ9Y3E0 138 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 EML6Q6ZMW3 1958 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 CTXND1A0A1B0GTU2 59 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 PGPEP1LA6NFU8 196 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 ZIC3O60481 467 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 RAC2P15153 192 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 CEACAM6P40199 344 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 LTC4SQ16873 150 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 TMEM256Q8N2U0 113 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 SGMS2Q8NHU3 365 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 DBX2Q6ZNG2 339 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 C17orf82Q86X59 251 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 FADS6Q8N9I5 356 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 CMTM2Q8TAZ6 248 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 NINJ1Q92982 152 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 ANAPC16Q96DE5 110 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 CCDC74BQ96LY2 380 aa10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 PSMG3Q9BT73 122 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC9-208ENST00000520857 C11orf1Q9H5F2 150 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms