RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 HSD11B1P28845 292 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 PRDX2P32119 198 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 CDKN2AP42771 156 aaKnown RBP3.81□□□□□ -1.8
SDCBP-207ENST00000520168 CDC34P49427 236 aaPredicted RBP3.81□□□□□ -1.8
SDCBP-207ENST00000520168 HOXA1P49639 335 aaPredicted RBP3.81□□□□□ -1.8
SDCBP-207ENST00000520168 SLURP1P55000 103 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 AP3S2P59780 193 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 RPL11P62913 178 aaKnown RBP3.81□□□□□ -1.8
SDCBP-207ENST00000520168 RAB40BQ12829 278 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 PRDX4Q13162 271 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 EIF2B1Q14232 305 aaKnown RBP3.81□□□□□ -1.8
SDCBP-207ENST00000520168 SPHARQ15513 63 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 DEFB136Q30KP8 78 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 CEACAM21Q3KPI0 293 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 PLCXD3Q63HM9 321 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 ELP2Q6IA86 826 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 ACSM6Q6P461 480 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 ACP7Q6ZNF0 438 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 GDPD3Q7L5L3 318 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 SLC35E3Q7Z769 313 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 NANOGP1Q8N7R0 232 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 C5orf56Q8N8D9 126 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 OR2T33Q8NG76 320 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 OR11H1Q8NG94 326 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 DYNC2LI1Q8TCX1 351 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 SAT2Q96F10 170 aaPredicted RBP3.81□□□□□ -1.8
SDCBP-207ENST00000520168 RNF170Q96K19 258 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 TSSK2Q96PF2 358 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 MGLLQ99685 303 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 NRIP2Q9BQI9 281 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 OR10A2Q9H208 303 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 FN3KQ9H479 309 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 CHMP1AQ9HD42 196 aaPredicted RBP3.81□□□□□ -1.8
SDCBP-207ENST00000520168 AMBNQ9NP70 447 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 HHLA2Q9UM44 414 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 DIMT1Q9UNQ2 313 aaKnown RBP3.81□□□□□ -1.8
SDCBP-207ENST00000520168 BAIAP2Q9UQB8 552 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 SIGLEC7Q9Y286 467 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 POLDIP2Q9Y2S7 368 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 RHBDD3Q9Y3P4 386 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 IER3IP1Q9Y5U9 82 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 LINC00312Q9Y6C7 94 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 CDH10Q9Y6N8 788 aa3.81□□□□□ -1.8
SDCBP-207ENST00000520168 KIAA2026Q5HYC2 2103 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 PNMA8CA0A1B0GUJ8 204 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 NUPR2A6NF83 97 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF98A6NK75 572 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF850A8MQ14 1090 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 F8W036 122 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 K7EQM0 130 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 CTDSP2O14595 271 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 HSPA12AO43301 675 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 PRKYO43930 277 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 SAP30O75446 220 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 CCNKO75909 580 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 NXPH2O95156 264 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 SOX14O95416 240 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 IGLV1-47P01700 117 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 TFF1P04155 84 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 OR8U9P0C7N5 309 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 OR5H8P0DN80 308 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 SLC2A1P11166 492 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 DBTP11182 482 aaKnown RBP3.8□□□□□ -1.8
SDCBP-207ENST00000520168 SPNP16150 400 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 GADD45AP24522 165 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 HTR1FP30939 366 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 CX3CR1P49238 355 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 GPM6AP51674 278 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 PRKXP51817 358 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 AP2S1P53680 142 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-207ENST00000520168 EDDM3BP56851 147 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 RUNX1Q01196 453 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF91Q05481 1191 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 ZNF616Q08AN1 781 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 MLLT11Q13015 90 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-207ENST00000520168 GPR50Q13585 617 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 AKIRIN2Q53H80 203 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 NXNL2Q5VZ03 156 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 TMPRSS11AQ6ZMR5 421 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 SLC38A6Q8IZM9 456 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 CD177Q8N6Q3 437 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 POC1AQ8NBT0 407 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 OR52L1Q8NGH7 329 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 OR5A2Q8NGI9 324 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 OR52I1Q8NGK6 324 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 HPSE2Q8WWQ2 592 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 AQP3Q92482 292 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 PIGCQ92535 297 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 SLAMF6Q96DU3 332 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 NOL4LQ96MY1 436 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-207ENST00000520168 ERMAPQ96PL5 475 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-207ENST00000520168 OR8B4Q96RC9 309 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 NMNAT3Q96T66 252 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 OR51J1Q9H342 316 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 OR51I2Q9H344 312 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 GAL3ST2Q9H3Q3 398 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 NIPAL2Q9H841 368 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 FAM212BQ9NTI7 297 aaPredicted RBP3.8□□□□□ -1.8
SDCBP-207ENST00000520168 DNAJC27Q9NZQ0 273 aa3.8□□□□□ -1.8
SDCBP-207ENST00000520168 CCDC59Q9P031 241 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms