RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 ABHD14AQ9BUJ0 271 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 PECRQ9BY49 303 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 RIMS4Q9H426 269 aaPredicted RBP9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 RAB22AQ9UL26 194 aa9.22□□□□□ -0.93
SH3RF1-205ENST00000511421 LANCL1O43813 399 aa9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 RAB3BP20337 219 aa9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 MYL9P24844 172 aa9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 FGF9P31371 208 aaPredicted RBP9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 NSUN5P1Q3KNT7 163 aa9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 TCTEX1D4Q5JR98 221 aa9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 C9orf152Q5JTZ5 239 aa9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 MOB1BQ7L9L4 216 aa9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 NDUFA11Q86Y39 141 aa9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 TGIF2LXQ8IUE1 241 aa9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 OR56B1Q8NGI3 324 aa9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 OR2T10Q8NGZ9 312 aa9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 RBMXL1Q96E39 390 aaKnown RBP9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 CHMP1AQ9HD42 196 aaPredicted RBP9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 PLSCR3Q9NRY6 295 aa9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 TXNL4BQ9NX01 149 aaKnown RBP9.21□□□□□ -0.93
SH3RF1-205ENST00000511421 NOTCH3Q9UM47 2321 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 A0A0B4J203 849 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 TXNL1O43396 289 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 RGS11O94810 467 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 MOGAT2Q3SYC2 334 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 C10orf99Q6UWK7 81 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 CENPVQ7Z7K6 275 aaPredicted RBP9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 SETD6Q8TBK2 473 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 Q9N2K0 584 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 ABRACLQ9P1F3 81 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 STUB1Q9UNE7 303 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 KCNK7Q9Y2U2 307 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 WIPF1O43516 503 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 MOSP00540 346 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 OPN1MWP04001 364 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 OPN1MW2P0DN77 364 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 OPN1MW3P0DN78 364 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 KCTD21Q4G0X4 260 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 Q8N9W7 124 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 IL1F10Q8WWZ1 152 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 IFI27L2Q9H2X8 130 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 C12orf4Q9NQ89 552 aa9.2□□□□□ -0.94
SH3RF1-205ENST00000511421 SMIM30A4D0T7 59 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 RAB27BO00194 218 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 KCNAB3O43448 404 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 IGHG2P01859 326 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 SCTP09683 121 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 SLC2A2P11168 524 aaPredicted RBP9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 RAB6AP20340 208 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 OR3A3P47888 321 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 HLA-DRB3P79483 266 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 LSAMPQ13449 338 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 ZNF833PQ6ZTB9 187 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 OR2AK2Q8NG84 335 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 NABP2Q9BQ15 211 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 CMSS1Q9BQ75 279 aaKnown RBP9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 MRPL20Q9BYC9 149 aaKnown RBP9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 PARP12Q9H0J9 701 aaKnown RBP9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 OR51E2Q9H255 320 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 MGAT4AQ9UM21 535 aa9.19□□□□□ -0.94
SH3RF1-205ENST00000511421 SAA2-SAA4A0A096LPE2 208 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 LINC01548A6NM66 108 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 NCBP2LA6PVI3 153 aaKnown RBP9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 NOTOA8MTQ0 251 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 ITGB1BP1O14713 200 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 ST8SIA5O15466 376 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 SAA2P0DJI9 122 aaPredicted RBP9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 F2RL1P55085 397 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 DEFA6Q01524 100 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 OR8H1Q8NGG4 311 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 OR10R2Q8NGX6 335 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 PTX4Q96A99 478 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 RAB3CQ96E17 227 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 NOL4LQ96MY1 436 aaPredicted RBP9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 S1PR3Q99500 378 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 ZNF251Q9BRH9 671 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 AGMATQ9BSE5 352 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 ABCG5Q9H222 651 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 LIN7CQ9NUP9 197 aaKnown RBP9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 OR1A1Q9P1Q5 309 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 SLC23A1Q9UHI7 598 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 SSR3Q9UNL2 185 aa9.18□□□□□ -0.94
SH3RF1-205ENST00000511421 IGKV1-6A0A0C4DH72 117 aa9.17□□□□□ -0.94
SH3RF1-205ENST00000511421 PSMB11A5LHX3 300 aa9.17□□□□□ -0.94
SH3RF1-205ENST00000511421 MFNGO00587 321 aa9.17□□□□□ -0.94
SH3RF1-205ENST00000511421 GNB3P16520 340 aa9.17□□□□□ -0.94
SH3RF1-205ENST00000511421 NEDD8Q15843 81 aa9.17□□□□□ -0.94
SH3RF1-205ENST00000511421 SLC35E3Q7Z769 313 aa9.17□□□□□ -0.94
SH3RF1-205ENST00000511421 ZNF329Q86UD4 541 aa9.17□□□□□ -0.94
SH3RF1-205ENST00000511421 TPRA1Q86W33 373 aa9.17□□□□□ -0.94
SH3RF1-205ENST00000511421 FAM71E2Q8N5Q1 922 aa9.17□□□□□ -0.94
SH3RF1-205ENST00000511421 OR4X2Q8NGF9 303 aa9.17□□□□□ -0.94
SH3RF1-205ENST00000511421 R3HDM4Q96D70 268 aa9.17□□□□□ -0.94
SH3RF1-205ENST00000511421 RITA1Q96K30 269 aa9.17□□□□□ -0.94
SH3RF1-205ENST00000511421 A0A1W2PRX2 142 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 TCRBV4S1A1TA0A5B7 111 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 SERPINE3A8MV23 424 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 TRDCB7Z8K6 153 aa9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 HIST1H1DP16402 221 aaKnown RBP9.16□□□□□ -0.94
SH3RF1-205ENST00000511421 ZBTB25P24278 435 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms