RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ACOT12Q8WYK0 555 aa2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 KLK6Q92876 244 aa2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 RBMXL1Q96E39 390 aaKnown RBP2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 GPR82Q96P67 336 aa2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 OR2A5Q96R48 311 aa2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 TSC22D3Q99576 134 aa2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 ZNF2Q9BSG1 426 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 THTPAQ9BU02 230 aa2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 TMEM147Q9BVK8 224 aa2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 RNASE7Q9H1E1 156 aaKnown RBP2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 C12orf10Q9HB07 376 aa2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 SND1-IT1Q9HBX3 110 aa2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 KCNIP2Q9NS61 270 aa2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 RWDD2AQ9UIY3 292 aa2.59□□□□□ -1.99
HMGB1P22-201ENST00000505315 GRIN2BQ13224 1484 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 IGHV1-45A0A0A0MS14 117 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 IGHV3-49A0A0A0MS15 119 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 hADV38S2A0JD32 116 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 A8MWL6 223 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 KLLNB2CW77 178 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 C4orf51C9J302 202 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 INMT-MINDY4F8WBC2 141 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 H0YJW9 148 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 C15orf65H3BRN8 121 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 HLA-DRB1P01911 266 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 GIG44P09565 113 aaPredicted RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 IGHV1-8P0DP01 117 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 ERP29P30040 261 aaKnown RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 ZNF133P52736 654 aaPredicted RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 CRISP3P54108 245 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 CMC4P56277 68 aaPredicted RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 DEFA3P59666 94 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 SNRPD2P62316 118 aaKnown RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 RHOBP62745 196 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 IGLV3-21P80748 117 aaPredicted RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 FLI1Q01543 452 aaPredicted RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 GNA12Q03113 381 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 CCDC153Q494R4 210 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 TEX30Q5JUR7 227 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 C9orf129Q5T035 196 aaKnown RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 AKR1C8PQ5T2L2 129 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 LAIR2Q6ISS4 152 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 TBPL2Q6SJ96 375 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 C18orf65Q6ZTR6 163 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 GOLT1AQ6ZVE7 132 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 LINC01551Q86U37 167 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 DHFR2Q86XF0 187 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 FAM24BQ8N5W8 94 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 EIF4E3Q8N5X7 224 aaKnown RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 YIPF7Q8N8F6 280 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 OR2M3Q8NG83 312 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 CT55Q8WUE5 264 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 FAM104AQ969W3 186 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 ZNF414Q96IQ9 312 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 CNBD2Q96M20 576 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 C1orf147Q96MC9 270 aaPredicted RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 TBL1YQ9BQ87 522 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 COMMD5Q9GZQ3 224 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 CCDC90BQ9GZT6 254 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 MIXL1Q9H2W2 232 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 GOLGA2P5Q9HBQ8 144 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 PRTFDC1Q9NRG1 225 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 C8orf17Q9NRJ1 99 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 MED29Q9NX70 200 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 C21orf62Q9NYP8 219 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 MRPL27Q9P0M9 148 aaKnown RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 ANAPC10Q9UM13 185 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 SSR3Q9UNL2 185 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 HSPB11Q9Y547 144 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 SETD1AO15047 1707 aaKnown RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 PIK3C2GO75747 1445 aa2.58□□□□□ -2
HMGB1P22-201ENST00000505315 WRNQ14191 1432 aaPredicted RBP eCLIP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 TDRD15B5MCY1 1934 aaKnown RBP2.58□□□□□ -2
HMGB1P22-201ENST00000505315 DNMT1P26358 1616 aaKnown RBP2.57□□□□□ -2
HMGB1P22-201ENST00000505315 CAMSAP1Q5T5Y3 1602 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 hCG_1818297A0A087WSY0 165 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 IGHV3-72A0A0B4J1Y9 119 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 OR4C45A6NMZ5 311 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 ZNF729A6NN14 1252 aaPredicted RBP2.57□□□□□ -2
HMGB1P22-201ENST00000505315 A8MT66 165 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 M0R381 172 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 GSTZ1O43708 216 aaPredicted RBP2.57□□□□□ -2
HMGB1P22-201ENST00000505315 HLA-DQB1P01920 261 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 CRYGDP07320 174 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 NBEAP1P0C6P0 100 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 CPMP14384 443 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 CDK2P24941 298 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 PHBP35232 272 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 GABRA4P48169 554 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 GNG5P63218 68 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 DAZ2Q13117 558 aaKnown RBP2.57□□□□□ -2
HMGB1P22-201ENST00000505315 BTN1A1Q13410 526 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 RHEBQ15382 184 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 GRK1Q15835 563 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 LUZP6Q538Z0 58 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 KLHL12Q53G59 568 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 SAMD13Q5VXD3 122 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 NANOGP8Q6NSW7 305 aa2.57□□□□□ -2
HMGB1P22-201ENST00000505315 SMARCD3Q6STE5 483 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms