RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PACRGQ96M98 296 aaPredicted RBP14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 TMEM204Q9BSN7 226 aa14.32□□□□□ -0.12
PCDHA1-203ENST00000504120 HBZP02008 142 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 CXCL2P19875 107 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 STARD6P59095 220 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 NPVFQ9HCQ7 196 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 BET1LQ9NYM9 111 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 SULT1A2P50226 295 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 ZNF880Q6PDB4 577 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 LILRB1Q8NHL6 650 aaPredicted RBP14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 ABHD14BQ96IU4 210 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 SNX22Q96L94 193 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 ZNF714Q96N38 554 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 M0R143 59 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 HOXB1P14653 301 aaPredicted RBP14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 SAP25Q8TEE9 199 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 TRAV34A0A0B4J273 112 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 DHRS7CA6NNS2 312 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 CCL21O00585 134 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 ISLRO14498 428 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 ADAM11O75078 769 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 RCC1P18754 421 aaPredicted RBP14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 G0S2P27469 103 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 RIPPLY2Q5TAB7 128 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 SLC16A13Q7RTY0 426 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 AQP3Q92482 292 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 FUT9Q9Y231 359 aa14.31□□□□□ -0.12
PCDHA1-203ENST00000504120 MRPL54Q6P161 138 aaKnown RBP14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 SLC25A38Q96DW6 304 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 OR2H2O95918 312 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 MAP1LC3CQ9BXW4 147 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 LHFPL6Q9Y693 200 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 A0A1W2PP11 408 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 PTBP3O95758 552 aaKnown RBP14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 SMIM6P0DI80 62 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 BCL2P10415 239 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 ERVFRD-1P60508 538 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 IGLV3-21P80748 117 aaPredicted RBP14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 LYRM7Q5U5X0 104 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 TMEM252Q8N6L7 170 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 PKIBQ9C010 78 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 FAM206AQ9NX38 181 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 HS3ST3B1Q9Y662 390 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 MPDU1O75352 247 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 OR5AU1Q8NGC0 362 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 IL19Q9UHD0 177 aa14.3□□□□□ -0.12
PCDHA1-203ENST00000504120 PCM1Q15154 2024 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 A0A1W2PPE3 182 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 CEBPEQ15744 281 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 UNQ9370/PRO34162Q6UXP9 181 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 FAM222BQ8WU58 562 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 RGP1Q92546 391 aaPredicted RBP14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 OR5AC2Q9NZP5 309 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 CBY3A6NI87 242 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 PRF1P14222 555 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 CCL8P80075 99 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 STPG1Q5TH74 334 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 DGAT2L7PQ6IED9 249 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 ZNF645Q8N7E2 425 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 DNASE2BQ8WZ79 361 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 OPN3Q9H1Y3 402 aaPredicted RBP14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 HSF4Q9ULV5 492 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 HIGD1AQ9Y241 93 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 MFSD2BA6NFX1 497 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 MPV17P39210 176 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 CHAC2Q8WUX2 184 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 PITPNC1Q9UKF7 332 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 PILRBQ9UKJ0 227 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 MC5RP33032 325 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 VWA1Q6PCB0 445 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 FGF11Q92914 225 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 OR2V2Q96R30 315 aa14.29□□□□□ -0.12
PCDHA1-203ENST00000504120 SCTP09683 121 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 REG1BP48304 166 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 RAB24Q969Q5 203 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 SNRNP40Q96DI7 357 aaKnown RBP14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 CCL13Q99616 98 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 ZNF638Q14966 1978 aaKnown RBP14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 Q6ZN92 141 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 WNT2BQ93097 391 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 PAXXQ9BUH6 204 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 GPR6P46095 362 aaPredicted RBP14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 RBPMS2Q6ZRY4 209 aaKnown RBP14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 SAXO1Q8IYX7 474 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 TMEM171Q8WVE6 324 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 TUBD1Q9UJT1 453 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 SF3B6Q9Y3B4 125 aaKnown RBP14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 IGKV1D-42A0A075B6H8 117 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 SNURFLB1AK76 121 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 HYPMO75409 117 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 APCSP02743 223 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 COX5BP10606 129 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 IER3P46695 156 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 LDLRAD3Q86YD5 345 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 TPRX1Q8N7U7 411 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 NRIP2Q9BQI9 281 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 KNTC1P50748 2209 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 IGHMP01871 453 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 FTH1P19P0C7X4 201 aa14.28□□□□□ -0.12
PCDHA1-203ENST00000504120 TNFRSF19Q9NS68 423 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms