RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 RP1L1Q8IWN7 2480 aaPredicted RBP4.43□□□□□ -1.7
CLDND1-208ENST00000503004 A0A096LPE4 126 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 A0A1W2PPZ6 126 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 PINLYPA6NC86 204 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 FOXI3A8MTJ6 420 aaPredicted RBP4.43□□□□□ -1.7
CLDND1-208ENST00000503004 ZNF705FA8MVS1 300 aaPredicted RBP4.43□□□□□ -1.7
CLDND1-208ENST00000503004 H3BQ15 152 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 TNFSF13O75888 250 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 P04436 131 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 ZNF705DP0CH99 300 aaPredicted RBP4.43□□□□□ -1.7
CLDND1-208ENST00000503004 ZNF705BP0CI00 300 aaPredicted RBP4.43□□□□□ -1.7
CLDND1-208ENST00000503004 CD33P20138 364 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 FUT3P21217 361 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 GLIPR1P48060 266 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 CLDN18P56856 261 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 B3GALT5-AS1P59052 145 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 DLK1P80370 383 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 FAM27BQ5VT28 67 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 C9orf135Q5VTT2 229 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 ZNF880Q6PDB4 577 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 SLC23A3Q6PIS1 610 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 PPP1R32Q7Z5V6 425 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 LHFPL1Q86WI0 220 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 UBALD2Q8IYN6 164 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 OR10D3Q8NH80 312 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 PP6455Q8WZ26 134 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 BCL2L2Q92843 193 aaPredicted RBP4.43□□□□□ -1.7
CLDND1-208ENST00000503004 SPTSSAQ969W0 71 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 REEP6Q96HR9 211 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 LOXL4Q96JB6 756 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 HIST1H2AAQ96QV6 131 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 LIME1Q9H400 295 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 WFDC1Q9HC57 220 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 SLC2A9Q9NRM0 540 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 SMPXQ9UHP9 88 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 ANAPC10Q9UM13 185 aa4.43□□□□□ -1.7
CLDND1-208ENST00000503004 LRRC3CA6NJW4 275 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 ZNF716A6NP11 495 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 K7EPK0 472 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 SYNGR3O43761 229 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 SFT2D2O95562 160 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 CRYGSP22914 178 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 OR10J1P30954 320 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 HIST1H3AP68431 136 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 MRPS34P82930 218 aaKnown RBP4.42□□□□□ -1.7
CLDND1-208ENST00000503004 PSG4Q00888 419 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 SRSF2Q01130 221 aaKnown RBP4.42□□□□□ -1.7
CLDND1-208ENST00000503004 CEACAM16Q2WEN9 425 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 PIGYQ3MUY2 71 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 FOXL2NBQ6ZUU3 175 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 AAED1Q7RTV5 226 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 SULF2Q8IWU5 870 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 FAM71E2Q8N5Q1 922 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 ST6GALNAC3Q8NDV1 305 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 ZNF596Q8TC21 504 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 SDSLQ96GA7 329 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 GUCD1Q96NT3 240 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 SPXQ9BT56 116 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 MEGF9Q9H1U4 602 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 SH3BGRL3Q9H299 93 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 HIPK2Q9H2X6 1198 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 HSPB7Q9UBY9 170 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 ST3GAL6Q9Y274 331 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 TNRC6BQ9UPQ9 1833 aaKnown RBP4.42□□□□□ -1.7
CLDND1-208ENST00000503004 IGKV1-12A0A0C4DH73 117 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 FIGNL2A6NMB9 653 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 CEACAM18A8MTB9 384 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 C9orf172C9J069 976 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 CER1O95813 267 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 IGKV1D-12P01611 117 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 CCL2P13500 99 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 MMP9P14780 707 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 SPINK2P20155 84 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 CCNOP22674 350 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 GDF1P27539 372 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 PTGER4P35408 488 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 ZNF133P52736 654 aaPredicted RBP4.42□□□□□ -1.7
CLDND1-208ENST00000503004 TAS2R31P59538 309 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 CCL20P78556 96 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 ZNF92Q03936 586 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 SRYQ05066 204 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 TPTE2P1Q5T6R2 138 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 WDR5BQ86VZ2 330 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 OR2M7Q8NG81 312 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 FAM213BQ8TBF2 198 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 ERGIC1Q969X5 290 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 TMEM18Q96B42 140 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 GPR146Q96CH1 333 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 ZNF479Q96JC4 524 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 Q96M66 194 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 FOXB1Q99853 325 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 HES7Q9BYE0 225 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 NMES1Q9C002 83 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 TMEM38BQ9NVV0 291 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 FBXL17Q9UF56 701 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 KIAA1549Q9HCM3 1950 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 DMXL2Q8TDJ6 3036 aa4.42□□□□□ -1.7
CLDND1-208ENST00000503004 TRAV30A0A087WSZ9 112 aa4.41□□□□□ -1.7
CLDND1-208ENST00000503004 IGHV2OR16-5A0A0B4J2B6 119 aa4.41□□□□□ -1.7
CLDND1-208ENST00000503004 HSD17B6O14756 317 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms