RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CEACAM21Q3KPI0 293 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 SCCPDHQ8NBX0 429 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 PLPPR1Q8TBJ4 325 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 SSMEM1Q8WWF3 244 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 NANOS1Q8WY41 292 aaKnown RBP11.45□□□□□ -0.58
GPC1-209ENST00000495100 RTL8AQ9BWD3 113 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 OR2W1Q9Y3N9 320 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 LINC00587B1AMM8 73 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 FABP1P07148 127 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 COL8A2P25067 703 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 ECI1P42126 302 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 GLIPR1P48060 266 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 FGF12P61328 243 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 HABP2Q14520 560 aaPredicted RBP11.45□□□□□ -0.58
GPC1-209ENST00000495100 RNFT1Q5M7Z0 435 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 Q6ZPA2 131 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 H2BFWTQ7Z2G1 175 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 EIF4E3Q8N5X7 224 aaKnown RBP11.45□□□□□ -0.58
GPC1-209ENST00000495100 GPR61Q9BZJ8 451 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 ZNF703Q9H7S9 590 aaPredicted RBP11.45□□□□□ -0.58
GPC1-209ENST00000495100 DOPEY2Q9Y3R5 2298 aa11.45□□□□□ -0.58
GPC1-209ENST00000495100 M0R1B8 84 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 DVL1O14640 695 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 ACAA1P09110 424 aaPredicted RBP11.44□□□□□ -0.58
GPC1-209ENST00000495100 CD200P41217 278 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 WNT5AP41221 380 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 EIF3IQ13347 325 aaKnown RBP11.44□□□□□ -0.58
GPC1-209ENST00000495100 IL13RA2Q14627 380 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 KCNMB1Q16558 191 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 TMEM211Q6ICI0 200 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 FAM185AQ8N0U4 392 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 UBALD2Q8IYN6 164 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 ZNF561Q8N587 486 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 RHOVQ96L33 236 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 FGF23Q9GZV9 251 aaPredicted RBP11.44□□□□□ -0.58
GPC1-209ENST00000495100 COLCA2A8K830 154 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 SH2D1BO14796 132 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 ZZEF1O43149 2961 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 CYTIPO60759 359 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 MT-ND4LP03901 98 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 SP1P08047 785 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 FGF7P21781 194 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 RAB4BP61018 213 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 ZFP36L1Q07352 338 aaKnown RBP11.44□□□□□ -0.58
GPC1-209ENST00000495100 VWA1Q6PCB0 445 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 OR4C12Q96R67 309 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 FAM208BQ5VWN6 2430 aa11.44□□□□□ -0.58
GPC1-209ENST00000495100 LOC102723996A0A087X1L8 192 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 TRAV24A0A0B4J272 114 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 MAP1LC3B2A6NCE7 125 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 ARR3P36575 388 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 LHX2P50458 406 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 ERVFRD-1P60508 538 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 SLC38A11Q08AI6 406 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 PRAMEF5Q5TYX0 476 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 DHRS7BQ6IAN0 325 aaPredicted RBP11.43□□□□□ -0.58
GPC1-209ENST00000495100 MAP1LC3BQ9GZQ8 125 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 TANC2Q9HCD6 1990 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 MALRD1Q5VYJ5 2156 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 IGLV3-32A0A0A0MS00 114 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 A0A1W2PPV4 95 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 PGPEP1LA6NFU8 196 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 SEC11BP0C7V7 166 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 SELLP14151 372 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 OTX1P32242 354 aaPredicted RBP11.43□□□□□ -0.58
GPC1-209ENST00000495100 MPV17P39210 176 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 GALMQ96C23 342 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 WDYHV1Q96HA8 205 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 REPIN1Q9BWE0 567 aaKnown RBP11.43□□□□□ -0.58
GPC1-209ENST00000495100 TAAR3PQ9P1P4 343 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 ANKHD1Q8IWZ3 2542 aaKnown RBP11.43□□□□□ -0.58
GPC1-209ENST00000495100 LRP4O75096 1905 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 SETD2Q9BYW2 2564 aaPredicted RBP11.43□□□□□ -0.58
GPC1-209ENST00000495100 M0R1X1 148 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 PHOX2AO14813 284 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 HBG1P69891 147 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 HBG2P69892 147 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 FOXO1Q12778 655 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 GCSAMLQ5JQS6 135 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 OPN3Q9H1Y3 402 aaPredicted RBP11.43□□□□□ -0.58
GPC1-209ENST00000495100 RPH3ALQ9UNE2 315 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 ATP23Q9Y6H3 246 aa11.43□□□□□ -0.58
GPC1-209ENST00000495100 ZG16O60844 167 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 MMP7P09237 267 aaPredicted RBP11.42□□□□□ -0.58
GPC1-209ENST00000495100 CLDN18P56856 261 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 SRPXP78539 464 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 OR8B8Q15620 311 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 FGFRL1Q8N441 504 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 ZNRF1Q8ND25 227 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 SSX3Q99909 188 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 SEMA5BQ9P283 1151 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 TRBV6-7A0A0A0MS04 114 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 TRAV38-1A0A0B4J264 116 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 PPP1R2P9O14990 202 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 FER1L6-AS2Q96M78 137 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 KLF13Q9Y2Y9 288 aaPredicted RBP11.42□□□□□ -0.58
GPC1-209ENST00000495100 CEP192Q8TEP8 1941 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 SLC35B1P78383 322 aa11.42□□□□□ -0.58
GPC1-209ENST00000495100 PDLIM3Q53GG5 364 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms