RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 POLR3KQ9Y2Y1 108 aaPredicted RBP9.75□□□□□ -0.85
CRNKL1-204ENST00000490910 TBL2Q9Y4P3 447 aaKnown RBP9.75□□□□□ -0.85
CRNKL1-204ENST00000490910 CEACAM6P40199 344 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 SLC35B1P78383 322 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 KIAA1644Q3SXP7 199 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 C12orf54Q6X4T0 127 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 TMEM256Q8N2U0 113 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 PPP1R35Q8TAP8 253 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 TAAR6Q96RI8 345 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 WNT10AQ9GZT5 417 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 CABIN1Q9Y6J0 2220 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 OTOL1A6NHN0 477 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 TOX3O15405 576 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 NPIPB7O75200 414 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 PGLYRP1O75594 196 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 PATE4P0C8F1 98 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 BTF3P20290 206 aaKnown RBP9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 CEACAM16Q2WEN9 425 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 FBLN7Q53RD9 439 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 MOB1BQ7L9L4 216 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 WDFY1Q8IWB7 410 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 RLN3Q8WXF3 142 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 DOCK11Q5JSL3 2073 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 GAGE10A6NGK3 116 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 TSPAN2O60636 221 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 CER1O95813 267 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 APCSP02743 223 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 CAMPP49913 170 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 SPEM2Q0P670 501 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 LRRC75BQ2VPJ9 315 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 FBXO46Q6PJ61 603 aaPredicted RBP9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 TET1Q8NFU7 2136 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 CADM4Q8NFZ8 388 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 MBD3L1Q8WWY6 194 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 MRGPRX1Q96LB2 322 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 FOXB1Q99853 325 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 QTRT1Q9BXR0 403 aaKnown RBP9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 ABI3Q9P2A4 366 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 IGHV5-51A0A0C4DH38 117 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 IFITM10A6NMD0 228 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 SRSF10O75494 262 aaKnown RBP9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 CSRP1P21291 193 aaKnown RBP9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 UCP1P25874 307 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 CD38P28907 300 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 PLAURQ03405 335 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 DMWDQ09019 674 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 C19orf35Q6ZS72 473 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 IFI44Q8TCB0 444 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 ZNF721Q8TF20 911 aa9.74□□□□□ -0.85
CRNKL1-204ENST00000490910 C5orf49A4QMS7 147 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 MRPS21P82921 87 aaKnown RBP9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 PRDX4Q13162 271 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 TMEM171Q8WVE6 324 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 CLN8Q9UBY8 286 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 NPIPB13A6NJU9 1138 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 NPIPB4C9JG80 1138 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 CXorf1O96002 111 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 POU2F2P09086 479 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 SLC25A47Q6Q0C1 308 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 TCF23Q7RTU1 214 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 TMEM251Q8N6I4 163 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 OR10G3Q8NGC4 313 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 APOBEC3DQ96AK3 386 aaPredicted RBP9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 VWA8A3KMH1 1905 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 HELZP42694 1942 aaKnown RBP9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 IGKV1-9A0A0C4DH69 117 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 HELTA6NFD8 242 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 SH2D1BO14796 132 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 SCRG1O75711 98 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 CELA2BP08218 269 aaPredicted RBP9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 CD33P20138 364 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 SRIP30626 198 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 ADMP35318 185 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 OR1D5P58170 312 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 UBE2NP61088 152 aaKnown RBP9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 IGLV3-21P80748 117 aaPredicted RBP9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 ID3Q02535 119 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 AARDQ4LEZ3 155 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 LDLRAD2Q5SZI1 272 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 NIT1Q86X76 327 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 SFTPA2Q8IWL1 248 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 CPEB3Q8NE35 698 aaKnown RBP9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 GALMQ96C23 342 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 OR6C1Q96RD1 312 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 POLDIP2Q9Y2S7 368 aa9.73□□□□□ -0.85
CRNKL1-204ENST00000490910 NRG2O14511 850 aaPredicted RBP9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 SPINT2O43291 252 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 HLA-DQA1P01909 254 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 CTSBP07858 339 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 IL15RAQ13261 267 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 ACTL10Q5JWF8 245 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 TMEM56Q96MV1 263 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 OBP2BQ9NPH6 170 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 SLC45A2Q9UMX9 530 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 TMEM56-RWDD3S4R434 201 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 TGFBR3LH3BV60 316 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 K7EQS6 105 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 SELEP16581 610 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 BCL3P20749 454 aa9.72□□□□□ -0.85
CRNKL1-204ENST00000490910 SOX8P57073 446 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms