RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PSMD7P51665 324 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 C1QL4Q86Z23 238 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 ODF3L1Q8IXM7 274 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 OR2T10Q8NGZ9 312 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 SETD6Q8TBK2 473 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 IL1F10Q8WWZ1 152 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 R3HDM4Q96D70 268 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 ARHGAP5-AS1Q96IT6 56 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 YPEL2Q96QA6 119 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 ABHD14AQ9BUJ0 271 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 PECRQ9BY49 303 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 YTHDF1Q9BYJ9 559 aaKnown RBP10.22□□□□□ -0.77
HDAC1-209ENST00000484305 CHMP1AQ9HD42 196 aaPredicted RBP10.22□□□□□ -0.77
HDAC1-209ENST00000484305 ABRACLQ9P1F3 81 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 STEAP1Q9UHE8 339 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 HSF4Q9ULV5 492 aa10.22□□□□□ -0.77
HDAC1-209ENST00000484305 TRBV6-6A0A0A6YYG2 114 aa10.21□□□□□ -0.77
HDAC1-209ENST00000484305 LINC01548A6NM66 108 aa10.21□□□□□ -0.77
HDAC1-209ENST00000484305 NCBP2LA6PVI3 153 aaKnown RBP10.21□□□□□ -0.77
HDAC1-209ENST00000484305 TXNL1O43396 289 aa10.21□□□□□ -0.77
HDAC1-209ENST00000484305 LANCL1O43813 399 aa10.21□□□□□ -0.77
HDAC1-209ENST00000484305 MOSP00540 346 aa10.21□□□□□ -0.77
HDAC1-209ENST00000484305 PSMB9P28065 219 aa10.21□□□□□ -0.77
HDAC1-209ENST00000484305 PLAC9Q5JTB6 97 aa10.21□□□□□ -0.77
HDAC1-209ENST00000484305 C22orf42Q6IC83 251 aa10.21□□□□□ -0.77
HDAC1-209ENST00000484305 NOL4LQ96MY1 436 aaPredicted RBP10.21□□□□□ -0.77
HDAC1-209ENST00000484305 RIMS4Q9H426 269 aaPredicted RBP10.21□□□□□ -0.77
HDAC1-209ENST00000484305 PLSCR3Q9NRY6 295 aa10.21□□□□□ -0.77
HDAC1-209ENST00000484305 A0A0B4J203 849 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 TCRBV4S1A1TA0A5B7 111 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 IFITM5A6NNB3 132 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 RGS11O94810 467 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 IGHG2P01859 326 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 RAB3BP20337 219 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 GALP22466 123 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 MYL9P24844 172 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 OR3A3P47888 321 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 F2RL1P55085 397 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 LSAMPQ13449 338 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 MOGAT2Q3SYC2 334 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 LY6G6FQ5SQ64 297 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 MOB1BQ7L9L4 216 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 ZNF329Q86UD4 541 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 NR2C2APQ86WQ0 139 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 Q8N9W7 124 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 OR2AK2Q8NG84 335 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 OR4F17Q8NGA8 305 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 OR4X2Q8NGF9 303 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 OR56B1Q8NGI3 324 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 OR4F4Q96R69 305 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 PARP12Q9H0J9 701 aaKnown RBP10.2□□□□□ -0.78
HDAC1-209ENST00000484305 LINC00527Q9UJ94 153 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 RAB22AQ9UL26 194 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 NOTCH3Q9UM47 2321 aa10.2□□□□□ -0.78
HDAC1-209ENST00000484305 RRP15Q9Y3B9 282 aaKnown RBP10.2□□□□□ -0.78
HDAC1-209ENST00000484305 SAA2-SAA4A0A096LPE2 208 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 SMIM30A4D0T7 59 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 PSMB11A5LHX3 300 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 SERPINE3A8MV23 424 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 G3V4G9 280 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 ST8SIA5O15466 376 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 SCTP09683 121 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 SAA2P0DJI9 122 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-209ENST00000484305 RANBP1P43487 201 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 ZNF833PQ6ZTB9 187 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 SLC35E3Q7Z769 313 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 FCGR1BQ92637 280 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 S1PR3Q99500 378 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 NABP2Q9BQ15 211 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 CMSS1Q9BQ75 279 aaKnown RBP10.19□□□□□ -0.78
HDAC1-209ENST00000484305 MRPL20Q9BYC9 149 aaKnown RBP10.19□□□□□ -0.78
HDAC1-209ENST00000484305 ABCG5Q9H222 651 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 IFI27L2Q9H2X8 130 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 Q9N2K0 584 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 C12orf4Q9NQ89 552 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 LIN7CQ9NUP9 197 aaKnown RBP10.19□□□□□ -0.78
HDAC1-209ENST00000484305 TXNL4BQ9NX01 149 aaKnown RBP10.19□□□□□ -0.78
HDAC1-209ENST00000484305 KCNK7Q9Y2U2 307 aa10.19□□□□□ -0.78
HDAC1-209ENST00000484305 TSSC4Q9Y5U2 329 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-209ENST00000484305 SLC2A2P11168 524 aaPredicted RBP10.18□□□□□ -0.78
HDAC1-209ENST00000484305 FGF9P31371 208 aaPredicted RBP10.18□□□□□ -0.78
HDAC1-209ENST00000484305 GPR12P47775 334 aa10.18□□□□□ -0.78
HDAC1-209ENST00000484305 HLA-DRB3P79483 266 aa10.18□□□□□ -0.78
HDAC1-209ENST00000484305 PDLIM3Q53GG5 364 aaPredicted RBP10.18□□□□□ -0.78
HDAC1-209ENST00000484305 ZNF773Q6PK81 442 aa10.18□□□□□ -0.78
HDAC1-209ENST00000484305 FAM71E2Q8N5Q1 922 aa10.18□□□□□ -0.78
HDAC1-209ENST00000484305 CHPT1Q8WUD6 406 aa10.18□□□□□ -0.78
HDAC1-209ENST00000484305 RAB3CQ96E17 227 aa10.18□□□□□ -0.78
HDAC1-209ENST00000484305 RITA1Q96K30 269 aa10.18□□□□□ -0.78
HDAC1-209ENST00000484305 OR1A1Q9P1Q5 309 aa10.18□□□□□ -0.78
HDAC1-209ENST00000484305 SLC23A1Q9UHI7 598 aa10.18□□□□□ -0.78
HDAC1-209ENST00000484305 STUB1Q9UNE7 303 aa10.18□□□□□ -0.78
HDAC1-209ENST00000484305 IGKV1-6A0A0C4DH72 117 aa10.17□□□□□ -0.78
HDAC1-209ENST00000484305 ZBTB25P24278 435 aa10.17□□□□□ -0.78
HDAC1-209ENST00000484305 CEACAM6P40199 344 aa10.17□□□□□ -0.78
HDAC1-209ENST00000484305 RPL39P5Q59GN2 51 aa10.17□□□□□ -0.78
HDAC1-209ENST00000484305 KHDC1LQ5JSQ8 128 aa10.17□□□□□ -0.78
HDAC1-209ENST00000484305 SAMD5Q5TGI4 173 aa10.17□□□□□ -0.78
HDAC1-209ENST00000484305 FOXRED2Q8IWF2 684 aa10.17□□□□□ -0.78
HDAC1-209ENST00000484305 STPG2Q8N412 459 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms