RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 RNLSQ5VYX0 342 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 FAM71F2Q6NXP2 309 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 UNQ5815/PRO19632Q6UWF5 114 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 ZNF833PQ6ZTB9 187 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 PPP1R27Q86WC6 154 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 SYS1Q8N2H4 156 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 OR4K15Q8NH41 348 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 MS4A10Q96PG2 267 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 PDCD1LG2Q9BQ51 273 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 THAP7Q9BT49 309 aaPredicted RBP12.28□□□□□ -0.44
DDX56-210ENST00000479440 FBXL15Q9H469 300 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 CNOT2Q9NZN8 540 aaKnown RBP12.28□□□□□ -0.44
DDX56-210ENST00000479440 RCC2Q9P258 522 aaKnown RBP12.28□□□□□ -0.44
DDX56-210ENST00000479440 NUBP2Q9Y5Y2 271 aa12.28□□□□□ -0.44
DDX56-210ENST00000479440 HERC2O95714 4834 aa12.27□□□□□ -0.44
DDX56-210ENST00000479440 SNTNA6NMZ2 147 aa12.27□□□□□ -0.45
DDX56-210ENST00000479440 TRGV3P03979 118 aa12.27□□□□□ -0.45
DDX56-210ENST00000479440 TFAP2AP05549 437 aa12.27□□□□□ -0.45
DDX56-210ENST00000479440 POLR2IP36954 125 aaKnown RBP12.27□□□□□ -0.45
DDX56-210ENST00000479440 GNMTQ14749 295 aa12.27□□□□□ -0.45
DDX56-210ENST00000479440 DNAL1Q4LDG9 190 aa12.27□□□□□ -0.45
DDX56-210ENST00000479440 ODF3L1Q8IXM7 274 aa12.27□□□□□ -0.45
DDX56-210ENST00000479440 TRUB1Q8WWH5 349 aaKnown RBP12.27□□□□□ -0.45
DDX56-210ENST00000479440 MRPS24Q96EL2 167 aaKnown RBP12.27□□□□□ -0.45
DDX56-210ENST00000479440 TMEM138Q9NPI0 162 aa12.27□□□□□ -0.45
DDX56-210ENST00000479440 KCNIP1Q9NZI2 227 aa12.27□□□□□ -0.45
DDX56-210ENST00000479440 POMPQ9Y244 141 aa12.27□□□□□ -0.45
DDX56-210ENST00000479440 SAA2-SAA4A0A096LPE2 208 aa12.26□□□□□ -0.45
DDX56-210ENST00000479440 C13orf42A0A1B0GVH6 325 aa12.26□□□□□ -0.45
DDX56-210ENST00000479440 CA11O75493 328 aa12.26□□□□□ -0.45
DDX56-210ENST00000479440 SAA2P0DJI9 122 aaPredicted RBP12.26□□□□□ -0.45
DDX56-210ENST00000479440 SOX2P48431 317 aa12.26□□□□□ -0.45
DDX56-210ENST00000479440 ADARB1P78563 741 aaKnown RBP12.26□□□□□ -0.45
DDX56-210ENST00000479440 GPR176Q14439 515 aa12.26□□□□□ -0.45
DDX56-210ENST00000479440 MEDAGQ5VYS4 303 aa12.26□□□□□ -0.45
DDX56-210ENST00000479440 FAM131AQ6UXB0 335 aa12.26□□□□□ -0.45
DDX56-210ENST00000479440 TMEM106AQ96A25 262 aa12.26□□□□□ -0.45
DDX56-210ENST00000479440 FAM103A1Q9BTL3 118 aaKnown RBP12.26□□□□□ -0.45
DDX56-210ENST00000479440 TAF9BQ9HBM6 251 aa12.26□□□□□ -0.45
DDX56-210ENST00000479440 A0A0G2JLM5 398 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 OR5H14A6NHG9 310 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 H3BUA1 57 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 EGR2P11161 476 aaPredicted RBP12.25□□□□□ -0.45
DDX56-210ENST00000479440 FASP25445 335 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 PPP1CCP36873 323 aaKnown RBP12.25□□□□□ -0.45
DDX56-210ENST00000479440 GBX2P52951 348 aaPredicted RBP12.25□□□□□ -0.45
DDX56-210ENST00000479440 SLC22A6Q4U2R8 563 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 ZNF554Q86TJ5 538 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 GAPTQ8N292 157 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 LFNGQ8NES3 379 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 OR2AK2Q8NG84 335 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 OR2K2Q8NGT1 345 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 GPR148Q8TDV2 347 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 RDH12Q96NR8 316 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 PLEKHA3Q9HB20 300 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 SIGLEC8Q9NYZ4 499 aa12.25□□□□□ -0.45
DDX56-210ENST00000479440 EXOGQ9Y2C4 368 aaKnown RBP12.25□□□□□ -0.45
DDX56-210ENST00000479440 A0A1W2PP11 408 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 GYG2O15488 501 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 YPEL1O60688 119 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 RBBP9O75884 186 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 TPPPO94811 219 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 GSTP1P09211 210 aaKnown RBP12.24□□□□□ -0.45
DDX56-210ENST00000479440 RCC1P18754 421 aaPredicted RBP12.24□□□□□ -0.45
DDX56-210ENST00000479440 BDKRB2P30411 391 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 SYNJ2BPP57105 145 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 CD81P60033 236 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 HTD2P86397 168 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 KLF5Q13887 457 aaPredicted RBP12.24□□□□□ -0.45
DDX56-210ENST00000479440 TATDN3Q17R31 274 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 SLC25A30Q5SVS4 291 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 RAB12Q6IQ22 244 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 LINC00322Q6ZN03 302 aaPredicted RBP12.24□□□□□ -0.45
DDX56-210ENST00000479440 LHFPL3Q86UP9 236 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 POC5Q8NA72 575 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 OR52L2PQ8NGH6 319 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 YPEL2Q96QA6 119 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 ISG20L2Q9H9L3 353 aaKnown RBP12.24□□□□□ -0.45
DDX56-210ENST00000479440 ZNF355PQ9NSJ1 428 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 MBNL3Q9NUK0 354 aaKnown RBP12.24□□□□□ -0.45
DDX56-210ENST00000479440 GMPPBQ9Y5P6 360 aa12.24□□□□□ -0.45
DDX56-210ENST00000479440 SLC22A1O15245 554 aa12.23□□□□□ -0.45
DDX56-210ENST00000479440 CNIH1O95406 144 aa12.23□□□□□ -0.45
DDX56-210ENST00000479440 OR3A3P47888 321 aa12.23□□□□□ -0.45
DDX56-210ENST00000479440 GYS2P54840 703 aa12.23□□□□□ -0.45
DDX56-210ENST00000479440 LY6G6FQ5SQ64 297 aa12.23□□□□□ -0.45
DDX56-210ENST00000479440 ZNF562Q6V9R5 426 aa12.23□□□□□ -0.45
DDX56-210ENST00000479440 IL34Q6ZMJ4 242 aa12.23□□□□□ -0.45
DDX56-210ENST00000479440 LAX1Q8IWV1 398 aa12.23□□□□□ -0.45
DDX56-210ENST00000479440 LGALS12Q96DT0 336 aa12.23□□□□□ -0.45
DDX56-210ENST00000479440 SLC2A8Q9NY64 477 aa12.23□□□□□ -0.45
DDX56-210ENST00000479440 PIPOXQ9P0Z9 390 aa12.23□□□□□ -0.45
DDX56-210ENST00000479440 GAB2Q9UQC2 676 aa12.23□□□□□ -0.45
DDX56-210ENST00000479440 PEX16Q9Y5Y5 336 aa12.23□□□□□ -0.45
DDX56-210ENST00000479440 ANKRD34BA5PLL1 514 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 E9PI62 339 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 SC5DO75845 299 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 FADS2O95864 444 aaKnown RBP12.22□□□□□ -0.45
DDX56-210ENST00000479440 CA2P00918 260 aa12.22□□□□□ -0.45
DDX56-210ENST00000479440 MAS1P04201 325 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms