RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 ARID1AO14497 2285 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 IGKV1D-13A0A0B4J2D9 117 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 DISC1C4P0D8 188 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 LY6LH3BQJ8 138 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 M0R1W7 72 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 BET1O15155 118 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 SLC31A2O15432 143 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 ENSAO43768 121 aaKnown RBP4.85□□□□□ -1.63
USP39-213ENST00000467885 TGFAP01135 160 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 IGLV1-47P01700 117 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 IGHV3-7P01780 117 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 RBP4P02753 201 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 TCRBP04435 133 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 AMY2AP04746 511 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 IFNA6P05013 189 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 MSMBP08118 114 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 OR8U9P0C7N5 309 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 IGKV1-13P0DP09 117 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 AADACP22760 399 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 PPP1CCP36873 323 aaKnown RBP4.85□□□□□ -1.63
USP39-213ENST00000467885 GLP1RP43220 463 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 LINC00205P59089 165 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 TSPAN5P62079 268 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 PRB3Q04118 309 aaPredicted RBP4.85□□□□□ -1.63
USP39-213ENST00000467885 KRTAP1-1Q07627 177 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 MEF2DQ14814 521 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 LTC4SQ16873 150 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 TMEM249Q2WGJ8 235 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 C4orf46Q504U0 113 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 ACTBL2Q562R1 376 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 LDLRAD2Q5SZI1 272 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 PRAMEF5Q5TYX0 476 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 TRIQKQ629K1 86 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 SHISA2Q6UWI4 295 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 ZNF782Q6ZMW2 699 aaPredicted RBP4.85□□□□□ -1.63
USP39-213ENST00000467885 GLCCI1Q86VQ1 547 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 ODF3L1Q8IXM7 274 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 ABHD12Q8N2K0 398 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 LILRB2Q8N423 598 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 KIR3DL3Q8N743 410 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 C8orf31Q8N9H6 132 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 OR11H6Q8NGC7 330 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 OR8U1Q8NH10 309 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 LEAP2Q969E1 77 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 ST6GALNAC6Q969X2 333 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 TBX15Q96SF7 602 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 ZNF251Q9BRH9 671 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 ZNF2Q9BSG1 426 aaPredicted RBP4.85□□□□□ -1.63
USP39-213ENST00000467885 SSBP4Q9BWG4 385 aaPredicted RBP4.85□□□□□ -1.63
USP39-213ENST00000467885 TMEM133Q9H2Q1 129 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 GAL3ST2Q9H3Q3 398 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 LPAR2Q9HBW0 351 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 SLC2A8Q9NY64 477 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 EHFQ9NZC4 300 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 SLC23A1Q9UHI7 598 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 ZNF221Q9UK13 617 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 JPT1Q9UK76 154 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 RNF150Q9ULK6 438 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 FLVCR2Q9UPI3 526 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 KPTNQ9Y664 436 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 MED13LQ71F56 2210 aa4.85□□□□□ -1.63
USP39-213ENST00000467885 TANC2Q9HCD6 1990 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 TRAV20A0A0B4J274 112 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 CENPVL3A0A0U1RRI6 287 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 A0A1W2PPE3 182 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 A0A1W2PPH5 198 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 CENPXA8MT69 81 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 RNASEK-C17orf49H0YIS7 233 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 J3QR06 171 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 PGLYRP1O75594 196 aaPredicted RBP4.84□□□□□ -1.63
USP39-213ENST00000467885 TOX4O94842 621 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 NDUFB6O95139 128 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 PPYP01298 95 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 NFYBP25208 207 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 INPP1P49441 399 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 GZMKP49863 264 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 MECP2P51608 486 aaKnown RBP4.84□□□□□ -1.63
USP39-213ENST00000467885 BRWD1-AS2P59051 145 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 ARPC4P59998 168 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 DHODHQ02127 395 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 EIF4EBP1Q13541 118 aaPredicted RBP4.84□□□□□ -1.63
USP39-213ENST00000467885 OXA1LQ15070 435 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 Q3ZCU0 254 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 CYB5R2Q6BCY4 276 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 MZT2BQ6NZ67 158 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 FAHD2BQ6P2I3 314 aaPredicted RBP4.84□□□□□ -1.63
USP39-213ENST00000467885 CCBE1Q6UXH8 406 aaPredicted RBP4.84□□□□□ -1.63
USP39-213ENST00000467885 SPNS3Q6ZMD2 512 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 IDO2Q6ZQW0 420 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 SLC25A48Q6ZT89 311 aaKnown RBP4.84□□□□□ -1.63
USP39-213ENST00000467885 TMEM17Q86X19 198 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 LINC00311Q8N616 119 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 OR10V1Q8NGI7 309 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 MARCH1Q8TCQ1 289 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 CHPT1Q8WUD6 406 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 TMEM186Q96B77 213 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 MOB3AQ96BX8 217 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 FAHD2AQ96GK7 314 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 C5orf30Q96GV9 206 aa4.84□□□□□ -1.63
USP39-213ENST00000467885 PRRT1Q99946 306 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms