RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ABHD14AQ9BUJ0 271 aa17.2■□□□□ 0.34
LIME1-203ENST00000465591 ACOT13Q9NPJ3 140 aa17.2■□□□□ 0.34
LIME1-203ENST00000465591 NCBP2LA6PVI3 153 aaKnown RBP17.19■□□□□ 0.34
LIME1-203ENST00000465591 LANCL1O43813 399 aa17.19■□□□□ 0.34
LIME1-203ENST00000465591 ARSBP15848 533 aa17.19■□□□□ 0.34
LIME1-203ENST00000465591 RAB11BQ15907 218 aa17.19■□□□□ 0.34
LIME1-203ENST00000465591 KCTD21Q4G0X4 260 aa17.19■□□□□ 0.34
LIME1-203ENST00000465591 ZNF367Q7RTV3 350 aa17.19■□□□□ 0.34
LIME1-203ENST00000465591 OR2W3Q7Z3T1 314 aa17.19■□□□□ 0.34
LIME1-203ENST00000465591 SLC35E3Q7Z769 313 aa17.19■□□□□ 0.34
LIME1-203ENST00000465591 FAM89BQ8N5H3 189 aa17.19■□□□□ 0.34
LIME1-203ENST00000465591 AK3Q9UIJ7 227 aa17.19■□□□□ 0.34
LIME1-203ENST00000465591 SERPINE3A8MV23 424 aa17.18■□□□□ 0.34
LIME1-203ENST00000465591 YPEL1O60688 119 aa17.18■□□□□ 0.34
LIME1-203ENST00000465591 MOSP00540 346 aa17.18■□□□□ 0.34
LIME1-203ENST00000465591 F2RL1P55085 397 aa17.18■□□□□ 0.34
LIME1-203ENST00000465591 TMEM50BP56557 158 aa17.18■□□□□ 0.34
LIME1-203ENST00000465591 LSAMPQ13449 338 aa17.18■□□□□ 0.34
LIME1-203ENST00000465591 KHDC1LQ5JSQ8 128 aa17.18■□□□□ 0.34
LIME1-203ENST00000465591 GALMQ96C23 342 aa17.18■□□□□ 0.34
LIME1-203ENST00000465591 YPEL2Q96QA6 119 aa17.18■□□□□ 0.34
LIME1-203ENST00000465591 PARP12Q9H0J9 701 aaKnown RBP17.18■□□□□ 0.34
LIME1-203ENST00000465591 PLEKHJ1Q9NW61 149 aa17.18■□□□□ 0.34
LIME1-203ENST00000465591 LDLRAD4O15165 306 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 TXNL1O43396 289 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 TNFAIP8O95379 198 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 PF4V1P10720 104 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 GPR12P47775 334 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 OR3A3P47888 321 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 ZNF773Q6PK81 442 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 C18orf65Q6ZTR6 163 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 SPARTQ8N0X7 666 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 WFDC9Q8NEX5 89 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 FAM3DQ96BQ1 224 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 S1PR3Q99500 378 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 MRPL20Q9BYC9 149 aaKnown RBP17.17■□□□□ 0.34
LIME1-203ENST00000465591 ABCG5Q9H222 651 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 CHMP1AQ9HD42 196 aaPredicted RBP17.17■□□□□ 0.34
LIME1-203ENST00000465591 LIN7CQ9NUP9 197 aaKnown RBP17.17■□□□□ 0.34
LIME1-203ENST00000465591 V9GY05 133 aa17.17■□□□□ 0.34
LIME1-203ENST00000465591 VEGFCP49767 419 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 OR10A3P58181 314 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 C2orf76Q3KRA6 126 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 LY6G6FQ5SQ64 297 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 HES5Q5TA89 166 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 STPG2Q8N412 459 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 FAM71E2Q8N5Q1 922 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 SETD6Q8TBK2 473 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 CHPT1Q8WUD6 406 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 IL1F10Q8WWZ1 152 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 FCGR1BQ92637 280 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 ARHGAP5-AS1Q96IT6 56 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 RITA1Q96K30 269 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 HSPB9Q9BQS6 159 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 URM1Q9BTM9 101 aaKnown RBP17.16■□□□□ 0.34
LIME1-203ENST00000465591 IFI27L2Q9H2X8 130 aa17.16■□□□□ 0.34
LIME1-203ENST00000465591 TRBV6-6A0A0A6YYG2 114 aa17.15■□□□□ 0.34
LIME1-203ENST00000465591 TMEM272A0A1B0GTI8 110 aa17.15■□□□□ 0.34
LIME1-203ENST00000465591 PLAC9Q5JTB6 97 aa17.15■□□□□ 0.34
LIME1-203ENST00000465591 CD200R1LQ6Q8B3 271 aa17.15■□□□□ 0.34
LIME1-203ENST00000465591 ZNF833PQ6ZTB9 187 aa17.15■□□□□ 0.34
LIME1-203ENST00000465591 NABP2Q9BQ15 211 aa17.15■□□□□ 0.34
LIME1-203ENST00000465591 NDUFB11Q9NX14 153 aa17.15■□□□□ 0.34
LIME1-203ENST00000465591 HSF4Q9ULV5 492 aa17.15■□□□□ 0.34
LIME1-203ENST00000465591 SAA2-SAA4A0A096LPE2 208 aa17.14■□□□□ 0.33
LIME1-203ENST00000465591 ST8SIA5O15466 376 aa17.14■□□□□ 0.33
LIME1-203ENST00000465591 SAA2P0DJI9 122 aaPredicted RBP17.14■□□□□ 0.33
LIME1-203ENST00000465591 IGLL1P15814 213 aa17.14■□□□□ 0.33
LIME1-203ENST00000465591 ETV3LQ6ZN32 361 aa17.14■□□□□ 0.33
LIME1-203ENST00000465591 PHF21AQ96BD5 680 aa17.14■□□□□ 0.33
LIME1-203ENST00000465591 ZNF251Q9BRH9 671 aa17.14■□□□□ 0.33
LIME1-203ENST00000465591 PECRQ9BY49 303 aa17.14■□□□□ 0.33
LIME1-203ENST00000465591 ABRACLQ9P1F3 81 aa17.14■□□□□ 0.33
LIME1-203ENST00000465591 RGS11O94810 467 aa17.13■□□□□ 0.33
LIME1-203ENST00000465591 PF4P02776 101 aa17.13■□□□□ 0.33
LIME1-203ENST00000465591 CD33P20138 364 aa17.13■□□□□ 0.33
LIME1-203ENST00000465591 CNTFRP26992 372 aa17.13■□□□□ 0.33
LIME1-203ENST00000465591 RPL23AP62750 156 aaKnown RBP17.13■□□□□ 0.33
LIME1-203ENST00000465591 UBE2UQ5VVX9 321 aa17.13■□□□□ 0.33
LIME1-203ENST00000465591 MOB1BQ7L9L4 216 aa17.13■□□□□ 0.33
LIME1-203ENST00000465591 FOXRED2Q8IWF2 684 aa17.13■□□□□ 0.33
LIME1-203ENST00000465591 OR2AK2Q8NG84 335 aa17.13■□□□□ 0.33
LIME1-203ENST00000465591 OR8H1Q8NGG4 311 aa17.13■□□□□ 0.33
LIME1-203ENST00000465591 OR1A1Q9P1Q5 309 aa17.13■□□□□ 0.33
LIME1-203ENST00000465591 STEAP1Q9UHE8 339 aa17.13■□□□□ 0.33
LIME1-203ENST00000465591 A0A087WXM4 84 aa17.12■□□□□ 0.33
LIME1-203ENST00000465591 A0A0B4J203 849 aa17.12■□□□□ 0.33
LIME1-203ENST00000465591 TRAV1-2A0A0B4J238 106 aa17.12■□□□□ 0.33
LIME1-203ENST00000465591 TRDV1A0A1B0GX56 115 aa17.12■□□□□ 0.33
LIME1-203ENST00000465591 AP4M1O00189 453 aa17.12■□□□□ 0.33
LIME1-203ENST00000465591 SCTP09683 121 aa17.12■□□□□ 0.33
LIME1-203ENST00000465591 HLA-DRB3P79483 266 aa17.12■□□□□ 0.33
LIME1-203ENST00000465591 MOGAT2Q3SYC2 334 aa17.12■□□□□ 0.33
LIME1-203ENST00000465591 LCNL1Q6ZST4 164 aa17.12■□□□□ 0.33
LIME1-203ENST00000465591 NR2C2APQ86WQ0 139 aa17.12■□□□□ 0.33
LIME1-203ENST00000465591 RASL11BQ9BPW5 248 aa17.12■□□□□ 0.33
LIME1-203ENST00000465591 RIMS4Q9H426 269 aaPredicted RBP17.12■□□□□ 0.33
LIME1-203ENST00000465591 Q9N2K0 584 aa17.12■□□□□ 0.33
LIME1-203ENST00000465591 KCNK7Q9Y2U2 307 aa17.12■□□□□ 0.33
LIME1-203ENST00000465591 SLC2A2P11168 524 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms