RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 SERPINE3A8MV23 424 aa12.66□□□□□ -0.38
ERCC3-206ENST00000462306 RGS11O94810 467 aa12.66□□□□□ -0.38
ERCC3-206ENST00000462306 SCTP09683 121 aa12.66□□□□□ -0.38
ERCC3-206ENST00000462306 CD3GP09693 182 aa12.66□□□□□ -0.38
ERCC3-206ENST00000462306 FAM106CPP0CH98 169 aa12.66□□□□□ -0.38
ERCC3-206ENST00000462306 RPS19P39019 145 aaKnown RBP12.66□□□□□ -0.38
ERCC3-206ENST00000462306 SCAND1P57086 179 aa12.66□□□□□ -0.38
ERCC3-206ENST00000462306 IDNKQ5T6J7 187 aa12.66□□□□□ -0.38
ERCC3-206ENST00000462306 ODF3L1Q8IXM7 274 aa12.66□□□□□ -0.38
ERCC3-206ENST00000462306 OR2T6Q8NHC8 308 aa12.66□□□□□ -0.38
ERCC3-206ENST00000462306 CITED1Q99966 193 aa12.66□□□□□ -0.38
ERCC3-206ENST00000462306 SLC25A33Q9BSK2 321 aa12.66□□□□□ -0.38
ERCC3-206ENST00000462306 PRSS22Q9GZN4 317 aa12.66□□□□□ -0.38
ERCC3-206ENST00000462306 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.66□□□□□ -0.38
ERCC3-206ENST00000462306 IGKV1-6A0A0C4DH72 117 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 TRDCB7Z8K6 153 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 AMY1AP04745 511 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 AMY2AP04746 511 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 FCGR3AP08637 254 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 EBI3Q14213 229 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 CDNFQ49AH0 187 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 MOB3BQ86TA1 216 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 LYG1Q8N1E2 194 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 DTX3Q8N9I9 347 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 SLC25A38Q96DW6 304 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 AKR1E2Q96JD6 320 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 PARP12Q9H0J9 701 aaKnown RBP12.65□□□□□ -0.38
ERCC3-206ENST00000462306 SERTAD4Q9NUC0 356 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 RHBDL2Q9NX52 303 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 OR1A1Q9P1Q5 309 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 ELF5Q9UKW6 265 aaPredicted RBP12.65□□□□□ -0.38
ERCC3-206ENST00000462306 ETV7Q9Y603 341 aa12.65□□□□□ -0.38
ERCC3-206ENST00000462306 IGHV3-72A0A0B4J1Y9 119 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 TXNL1O43396 289 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 LANCL1O43813 399 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 TMEM127O75204 238 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 IGKV1D-33P01593 117 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 IGKV1-33P01594 117 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 MRPS15P82914 257 aaKnown RBP12.64□□□□□ -0.39
ERCC3-206ENST00000462306 HERPUD1Q15011 391 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 ARL6IP1Q15041 203 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 C11orf88Q6PI97 169 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 TGIF2LXQ8IUE1 241 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 IZUMO1Q8IYV9 350 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 OR2AK2Q8NG84 335 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 IFI27L2Q9H2X8 130 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 SLC23A1Q9UHI7 598 aa12.64□□□□□ -0.39
ERCC3-206ENST00000462306 ZNF736B4DX44 427 aaPredicted RBP12.63□□□□□ -0.39
ERCC3-206ENST00000462306 ITGB1BP1O14713 200 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 SCGNO76038 276 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 TMEM11P17152 192 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 ZBTB25P24278 435 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 CD1BP29016 333 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 NCS1P62166 190 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 HES1Q14469 280 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 HNF4GQ14541 408 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 ZNF260Q3ZCT1 412 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 HACD4Q5VWC8 232 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 CROCCP3Q8IVE0 287 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 Q8N6K4 173 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 SGMS2Q8NHU3 365 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 EAF1Q96JC9 268 aaPredicted RBP12.63□□□□□ -0.39
ERCC3-206ENST00000462306 AGMATQ9BSE5 352 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 MRPS26Q9BYN8 205 aaKnown RBP12.63□□□□□ -0.39
ERCC3-206ENST00000462306 ZNF230Q9UIE0 474 aaPredicted RBP12.63□□□□□ -0.39
ERCC3-206ENST00000462306 SPATA2Q9UM82 520 aa12.63□□□□□ -0.39
ERCC3-206ENST00000462306 SAA2-SAA4A0A096LPE2 208 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 ST8SIA5O15466 376 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 FABP7O15540 132 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 TFAP2AP05549 437 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 LPLP06858 475 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 GSTP1P09211 210 aaKnown RBP12.62□□□□□ -0.39
ERCC3-206ENST00000462306 GSTT2P0CG29 244 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 GSTT2BP0CG30 244 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 SAA2P0DJI9 122 aaPredicted RBP12.62□□□□□ -0.39
ERCC3-206ENST00000462306 CEACAM6P40199 344 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 OR3A3P47888 321 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 ALDH3B2P48448 385 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 VBP1P61758 197 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 ARFRP1Q13795 201 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 KIR2DS1Q14954 304 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 SRSF7Q16629 238 aaKnown RBP eCLIP12.62□□□□□ -0.39
ERCC3-206ENST00000462306 ABCA11PQ4W5N1 156 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 Q6ZS49 121 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 ZNF833PQ6ZTB9 187 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 KLHDC1Q8N7A1 406 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 OR4A4PQ8NGN8 299 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 MAFIPQ8WZ33 124 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 RBMXL1Q96E39 390 aaKnown RBP12.62□□□□□ -0.39
ERCC3-206ENST00000462306 ZNF251Q9BRH9 671 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 CABLES2Q9BTV7 478 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 NAA50Q9GZZ1 169 aaKnown RBP12.62□□□□□ -0.39
ERCC3-206ENST00000462306 C11orf54Q9H0W9 315 aaPredicted RBP12.62□□□□□ -0.39
ERCC3-206ENST00000462306 MOB4Q9Y3A3 225 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 FBN3Q75N90 2809 aa12.62□□□□□ -0.39
ERCC3-206ENST00000462306 IGKV1D-8A0A087WSZ0 117 aa12.61□□□□□ -0.39
ERCC3-206ENST00000462306 TMEM235A6NFC5 223 aa12.61□□□□□ -0.39
ERCC3-206ENST00000462306 SH2D7A6NKC9 451 aaPredicted RBP12.61□□□□□ -0.39
ERCC3-206ENST00000462306 M0QZK8 103 aa12.61□□□□□ -0.39
ERCC3-206ENST00000462306 HSPA12AO43301 675 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms