RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 LIN7CQ9NUP9 197 aaKnown RBP8.05□□□□□ -1.12
SF3A3-204ENST00000462258 ABRACLQ9P1F3 81 aa8.05□□□□□ -1.12
SF3A3-204ENST00000462258 SAA2-SAA4A0A096LPE2 208 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 SOCS1O15524 211 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 LANCL1O43813 399 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 YPEL1O60688 119 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 IGHG2P01859 326 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 SAA2P0DJI9 122 aaPredicted RBP8.04□□□□□ -1.12
SF3A3-204ENST00000462258 CD33P20138 364 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 GPR12P47775 334 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 SLC35B1P78383 322 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 HLA-DRB3P79483 266 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 SSX1Q16384 188 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 ZNF880Q6PDB4 577 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 ZNF329Q86UD4 541 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 ODF3L1Q8IXM7 274 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 STPG2Q8N412 459 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 OR51D1Q8NGF3 324 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 OR8H1Q8NGG4 311 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 IL1F10Q8WWZ1 152 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 GALMQ96C23 342 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 YPEL2Q96QA6 119 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 HDHD3Q9BSH5 251 aaPredicted RBP8.04□□□□□ -1.12
SF3A3-204ENST00000462258 MRPL20Q9BYC9 149 aaKnown RBP8.04□□□□□ -1.12
SF3A3-204ENST00000462258 ABCG5Q9H222 651 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 IFI27L2Q9H2X8 130 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 C12orf4Q9NQ89 552 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 PLEKHJ1Q9NW61 149 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 NDUFB11Q9NX14 153 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 STEAP1Q9UHE8 339 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 AK3Q9UIJ7 227 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 LINC00527Q9UJ94 153 aa8.04□□□□□ -1.12
SF3A3-204ENST00000462258 FOXI3A8MTJ6 420 aaPredicted RBP8.03□□□□□ -1.12
SF3A3-204ENST00000462258 AP4M1O00189 453 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 MYL9P24844 172 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 RPL23AP62750 156 aaKnown RBP8.03□□□□□ -1.12
SF3A3-204ENST00000462258 MMDQ15546 238 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 OXLD1Q5BKU9 147 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 LY6G6FQ5SQ64 297 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 HES5Q5TA89 166 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 ZNF833PQ6ZTB9 187 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 FAM71E2Q8N5Q1 922 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 PHF21AQ96BD5 680 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 FAM3DQ96BQ1 224 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 RBMXL1Q96E39 390 aaKnown RBP8.03□□□□□ -1.12
SF3A3-204ENST00000462258 S1PR3Q99500 378 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 RASL11BQ9BPW5 248 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 RIMS4Q9H426 269 aaPredicted RBP8.03□□□□□ -1.12
SF3A3-204ENST00000462258 HSF4Q9ULV5 492 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 LRRC42Q9Y546 428 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 V9GY05 133 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 NOTCH3Q9UM47 2321 aa8.03□□□□□ -1.12
SF3A3-204ENST00000462258 TRBV6-6A0A0A6YYG2 114 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 TMEM272A0A1B0GTI8 110 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 PDCD5O14737 125 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 ST8SIA5O15466 376 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 DENRO43583 198 aaKnown RBP8.02□□□□□ -1.13
SF3A3-204ENST00000462258 RRP9O43818 475 aaKnown RBP8.02□□□□□ -1.13
SF3A3-204ENST00000462258 PRB2P02812 416 aaPredicted RBP8.02□□□□□ -1.13
SF3A3-204ENST00000462258 RANBP1P43487 201 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 OR3A3P47888 321 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 VEGFCP49767 419 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 PSMD7P51665 324 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 OR10A3P58181 314 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 FAM71F2Q6NXP2 309 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 CD200R1LQ6Q8B3 271 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 FAM89BQ8N5H3 189 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 COMMD1Q8N668 190 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 OR56B1Q8NGI3 324 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 ARHGAP5-AS1Q96IT6 56 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 NABP2Q9BQ15 211 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 HSPB9Q9BQS6 159 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 PECRQ9BY49 303 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 Q9H521 79 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 PLSCR3Q9NRY6 295 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 MGAT4AQ9UM21 535 aa8.02□□□□□ -1.13
SF3A3-204ENST00000462258 TRAV1-2A0A0B4J238 106 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 SHISA3A0PJX4 238 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 LINC01548A6NM66 108 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 NUDT19A8MXV4 375 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 LDLRAD4O15165 306 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 MRPS14O60783 128 aaKnown RBP8.01□□□□□ -1.13
SF3A3-204ENST00000462258 SLC2A2P11168 524 aaPredicted RBP8.01□□□□□ -1.13
SF3A3-204ENST00000462258 IGLL1P15814 213 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 PSMB9P28065 219 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 SOX6P35712 828 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 F2RL1P55085 397 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 TMEM50BP56557 158 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 ACTBP60709 375 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 PLA2G7Q13093 441 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 C2orf76Q3KRA6 126 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 PLAC9Q5JTB6 97 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 UBE2UQ5VVX9 321 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 ETV3LQ6ZN32 361 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 REC114Q7Z4M0 266 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 KLHL30-AS1Q8NEE0 82 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 CMSS1Q9BQ75 279 aaKnown RBP8.01□□□□□ -1.13
SF3A3-204ENST00000462258 GON7Q9BXV9 100 aa8.01□□□□□ -1.13
SF3A3-204ENST00000462258 PARP12Q9H0J9 701 aaKnown RBP8.01□□□□□ -1.13
SF3A3-204ENST00000462258 PIPOXQ9P0Z9 390 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms