RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	OR2T6	Q8NHC8	308 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	WIPF2	Q8TF74	440 aa	Predicted RBP	10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	MAFIP	Q8WZ33	124 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	ABHD14A	Q9BUJ0	271 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	ZNF702P	Q9H963	129 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	RHBDL2	Q9NX52	303 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	JPT1	Q9UK76	154 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507	MGAT4A	Q9UM21	535 aa		10.19	□□□□□ -0.78
FDPS-204	ENST00000461507		A6NDX4	124 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	FOXI3	A8MTJ6	420 aa	Predicted RBP	10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	SCGN	O76038	276 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	NAPSA	O96009	420 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	GAPDH	P04406	335 aa	Known RBP	10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	SNRNP70	P08621	437 aa	Known RBP	10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	TMEM11	P17152	192 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	GNG2	P59768	71 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	HNF4G	Q14541	408 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	CDNF	Q49AH0	187 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	MORN2	Q502X0	79 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	C9orf152	Q5JTZ5	239 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	GPR107	Q5VW38	600 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	CCBE1	Q6UXH8	406 aa	Predicted RBP	10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	ZNF554	Q86TJ5	538 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	TGIF2LX	Q8IUE1	241 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	OR13F1	Q8NGS4	319 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	OR5H6	Q8NGV6	325 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	PTX4	Q96A99	478 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	AKR1E2	Q96JD6	320 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	OCSTAMP	Q9BR26	566 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	SLC25A33	Q9BSK2	321 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	ETV7	Q9Y603	341 aa		10.18	□□□□□ -0.78
FDPS-204	ENST00000461507	TRIM64C	A6NLI5	447 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	SERPINE3	A8MV23	424 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	RAB27B	O00194	218 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	MFNG	O00587	321 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	BET1	O15155	118 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	ST8SIA5	O15466	376 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	IGKV1D-33	P01593	117 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	IGKV1-33	P01594	117 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	FCGR3A	P08637	254 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	SCT	P09683	121 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	FAM106CP	P0CH98	169 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	HTD2	P86397	168 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	ARL6IP1	Q15041	203 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	KPRP	Q5T749	579 aa	Predicted RBP	10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	STEAP3	Q658P3	488 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	SLC25A48	Q6ZT89	311 aa	Known RBP	10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	CROCCP3	Q8IVE0	287 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	OR8H3	Q8N146	312 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507		Q9N2K0	584 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	SERTAD4	Q9NUC0	356 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	OR1A1	Q9P1Q5	309 aa		10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	ZNF230	Q9UIE0	474 aa	Predicted RBP	10.17	□□□□□ -0.78
FDPS-204	ENST00000461507	NOTCH3	Q9UM47	2321 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	TRAV18	A0A075B6X5	111 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	IGHV1-3	A0A0C4DH29	117 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507		A0A1W2PPI3	338 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	TMEM235	A6NFC5	223 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	TRDC	B7Z8K6	153 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	LY6L	H3BQJ8	138 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	NOL3	O60936	208 aa	Known RBP	10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	OPN1MW	P04001	364 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	OPN1MW2	P0DN77	364 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	OPN1MW3	P0DN78	364 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	VSIG10L2	P0DP72	767 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	ZBTB25	P24278	435 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	RPS19	P39019	145 aa	Known RBP	10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	CEACAM6	P40199	344 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	HABP2	Q14520	560 aa	Predicted RBP	10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	KIR2DS1	Q14954	304 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507		Q3ZCU0	254 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	CT45A1	Q5HYN5	189 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507		Q6ZPA2	131 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	LINC00311	Q8N616	119 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	CT45A3	Q8NHU0	189 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	FAM110D	Q8TAY7	271 aa	Predicted RBP	10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	NUDCD2	Q8WVJ2	157 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	GINS4	Q9BRT9	223 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	ST6GALNAC5	Q9BVH7	336 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	PRSS22	Q9GZN4	317 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	WNT10A	Q9GZT5	417 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	NAA50	Q9GZZ1	169 aa	Known RBP	10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	DIABLO	Q9NR28	239 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	ELF5	Q9UKW6	265 aa	Predicted RBP	10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	KCNK7	Q9Y2U2	307 aa		10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	RBM7	Q9Y580	266 aa	Known RBP	10.16	□□□□□ -0.78
FDPS-204	ENST00000461507	TRBV6-6	A0A0A6YYG2	114 aa		10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	SH2D7	A6NKC9	451 aa	Predicted RBP	10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	FABP7	O15540	132 aa		10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	YPEL1	O60688	119 aa		10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	ZNF134	P52741	427 aa		10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	ZNF816	Q0VGE8	651 aa	Predicted RBP	10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	BEAN1	Q3B7T3	259 aa		10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	SAMD5	Q5TGI4	173 aa		10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	ZNF880	Q6PDB4	577 aa		10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	SAMD12	Q8N8I0	201 aa		10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	C8orf31	Q8N9H6	132 aa		10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	ZNF439	Q8NDP4	499 aa		10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	10.15	□□□□□ -0.78
FDPS-204	ENST00000461507	YPEL2	Q96QA6	119 aa		10.15	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms