RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 DEFA6Q01524 100 aa3.04□□□□□ -1.92
HMGB1P26-201ENST00000452520 EBPQ15125 230 aaKnown RBP3.04□□□□□ -1.92
HMGB1P26-201ENST00000452520 MMDQ15546 238 aa3.04□□□□□ -1.92
HMGB1P26-201ENST00000452520 UNQ9165/PRO28630Q6UXU0 137 aa3.04□□□□□ -1.92
HMGB1P26-201ENST00000452520 AMN1Q8IY45 258 aa3.04□□□□□ -1.92
HMGB1P26-201ENST00000452520 ZNF567Q8N184 647 aa3.04□□□□□ -1.92
HMGB1P26-201ENST00000452520 KRTCAP2Q8N6L1 136 aa3.04□□□□□ -1.92
HMGB1P26-201ENST00000452520 CLDN22Q8N7P3 220 aa3.04□□□□□ -1.92
HMGB1P26-201ENST00000452520 ALX4Q9H161 411 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P26-201ENST00000452520 TXNIPQ9H3M7 391 aa3.04□□□□□ -1.92
HMGB1P26-201ENST00000452520 ZNF586Q9NXT0 402 aa3.04□□□□□ -1.92
HMGB1P26-201ENST00000452520 DNMT1P26358 1616 aaKnown RBP3.04□□□□□ -1.92
HMGB1P26-201ENST00000452520 SNAPC4Q5SXM2 1469 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 ADGRL3Q9HAR2 1447 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 K7ERS5 55 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 MRASO14807 208 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 OR12D1P0DN82 309 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 CGB3P0DN86 165 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 CGB7P0DN87 165 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 DDTP30046 118 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 CDK9P50750 372 aaKnown RBP3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 CTBP2P56545 445 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 LINC00313P59037 77 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 RAB5BP61020 215 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 HERVK_113P63121 156 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 TMED2Q15363 201 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 SPA17Q15506 151 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 MAPK14Q16539 360 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 LINC00483Q53H64 154 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 S100A7AQ86SG5 101 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 TMEM86BQ8N661 226 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 Q8WTZ3 238 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 RBPMSQ93062 196 aaKnown RBP3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 ABHD14BQ96IU4 210 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 EBNA1BP2Q99848 306 aaKnown RBP3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 C11orf49Q9H6J7 331 aa3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 SAMHD1Q9Y3Z3 626 aaKnown RBP3.03□□□□□ -1.92
HMGB1P26-201ENST00000452520 FLT4P35916 1363 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 TRAV8-1A0A0A6YYK1 113 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 OR5H14A6NHG9 310 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 IGLL5B9A064 214 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 RTL8CO15255 209 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 FADS1O60427 444 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 DEDDO75618 318 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 WISP3O95389 354 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 SERPINA1P01009 418 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 IL4P05112 153 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 PTHLHP12272 177 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 MUC1P15941 1255 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 MPV17P39210 176 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 OR1E2P47887 323 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 SPCS3P61009 180 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 EMX1Q04741 257 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 ZNF616Q08AN1 781 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 PRDX4Q13162 271 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 EBI3Q14213 229 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 ENDOGQ14249 297 aaKnown RBP3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 PDGFRLQ15198 375 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 C1orf194Q5T5A4 169 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 CCDC121Q6ZUS5 278 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 HIST2H3AQ71DI3 136 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 LRRC25Q8N386 305 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 FER1L6-AS1Q8NA97 138 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 JOSD2Q8TAC2 188 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 RTN4IP1Q8WWV3 396 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 CMBLQ96DG6 245 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 STARD4Q96DR4 205 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 TMA16Q96EY4 203 aaKnown RBP3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 TRIB3Q96RU7 358 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 B9D2Q9BPU9 175 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 MED28Q9H204 178 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 KCNIP2Q9NS61 270 aa3.02□□□□□ -1.93
HMGB1P26-201ENST00000452520 CHD2O14647 1828 aaKnown RBP3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 C7orf66A4D0T2 115 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 D6RAR5 112 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 TRGV3P03979 118 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 CTLA4P16410 223 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 CASP8Q14790 479 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 KRTAP13-3Q3SY46 172 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 FAM78BQ5VT40 261 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 FAM71E1Q6IPT2 247 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 TBPL2Q6SJ96 375 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 ZNF550Q7Z398 422 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 ADM2Q7Z4H4 148 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 CALHM3Q86XJ0 350 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 SLC35B4Q969S0 331 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 DIRAS2Q96HU8 199 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 MED18Q9BUE0 208 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 TMEM109Q9BVC6 243 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 GABARAPL1Q9H0R8 117 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 OR51I2Q9H344 312 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 ZNF286AQ9HBT8 521 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 INIPQ9NRY2 104 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 IL37Q9NZH6 218 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 FBXO5Q9UKT4 447 aa3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 PCYT1BQ9Y5K3 369 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 RPRD2Q5VT52 1461 aaKnown RBP3.01□□□□□ -1.93
HMGB1P26-201ENST00000452520 KIF15Q9NS87 1388 aa3□□□□□ -1.93
HMGB1P26-201ENST00000452520 TTC21AQ8NDW8 1320 aa3□□□□□ -1.93
HMGB1P26-201ENST00000452520 PLXNB3Q9ULL4 1909 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms