RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 RAMP3O60896 148 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 PSMB8P28062 276 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 CHATP28329 748 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 LUMP51884 338 aaPredicted RBP16.45■□□□□ 0.22
VSX1-206ENST00000444511 RBM48Q5RL73 367 aaKnown RBP16.45■□□□□ 0.22
VSX1-206ENST00000444511 C6orf141Q5SZD1 244 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 FAM27D1Q5T7N8 215 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 C9orf66Q5T8R8 295 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 OR10K2Q6IF99 312 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 ODF3L1Q8IXM7 274 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 OR2AK2Q8NG84 335 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 YPEL2Q96QA6 119 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 NABP2Q9BQ15 211 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 SULT4A1Q9BR01 284 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 CHCHD6Q9BRQ6 235 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 FAAP24Q9BTP7 215 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 TMED9Q9BVK6 235 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 TMEM59Q9BXS4 323 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 VCXQ9H320 206 aa16.45■□□□□ 0.22
VSX1-206ENST00000444511 CASQ2O14958 399 aaPredicted RBP16.44■□□□□ 0.22
VSX1-206ENST00000444511 VSIG8P0DPA2 414 aa16.44■□□□□ 0.22
VSX1-206ENST00000444511 RPS27AP62979 156 aaKnown RBP16.44■□□□□ 0.22
VSX1-206ENST00000444511 TMEM65Q6PI78 240 aa16.44■□□□□ 0.22
VSX1-206ENST00000444511 C6orf201Q7Z4U5 140 aa16.44■□□□□ 0.22
VSX1-206ENST00000444511 LRRTM1Q86UE6 522 aa16.44■□□□□ 0.22
VSX1-206ENST00000444511 IL1F10Q8WWZ1 152 aa16.44■□□□□ 0.22
VSX1-206ENST00000444511 PHYHIPQ92561 330 aa16.44■□□□□ 0.22
VSX1-206ENST00000444511 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.44■□□□□ 0.22
VSX1-206ENST00000444511 STEAP1Q9UHE8 339 aa16.44■□□□□ 0.22
VSX1-206ENST00000444511 WSB1Q9Y6I7 421 aa16.44■□□□□ 0.22
VSX1-206ENST00000444511 SAA2-SAA4A0A096LPE2 208 aa16.43■□□□□ 0.22
VSX1-206ENST00000444511 NBR2O15453 112 aa16.43■□□□□ 0.22
VSX1-206ENST00000444511 CDK1P06493 297 aa16.43■□□□□ 0.22
VSX1-206ENST00000444511 SAA2P0DJI9 122 aaPredicted RBP16.43■□□□□ 0.22
VSX1-206ENST00000444511 OR3A3P47888 321 aa16.43■□□□□ 0.22
VSX1-206ENST00000444511 HMGN3Q15651 99 aa16.43■□□□□ 0.22
VSX1-206ENST00000444511 LY6G6FQ5SQ64 297 aa16.43■□□□□ 0.22
VSX1-206ENST00000444511 C1orf100Q5SVJ3 147 aa16.43■□□□□ 0.22
VSX1-206ENST00000444511 ZNF833PQ6ZTB9 187 aa16.43■□□□□ 0.22
VSX1-206ENST00000444511 KCNG3Q8TAE7 436 aa16.43■□□□□ 0.22
VSX1-206ENST00000444511 RITA1Q96K30 269 aa16.43■□□□□ 0.22
VSX1-206ENST00000444511 OR51J1Q9H342 316 aa16.43■□□□□ 0.22
VSX1-206ENST00000444511 CHMP1AQ9HD42 196 aaPredicted RBP16.43■□□□□ 0.22
VSX1-206ENST00000444511 PARP11Q9NR21 331 aa16.43■□□□□ 0.22
VSX1-206ENST00000444511 SEC14L6B5MCN3 397 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 PTGES3LE9PB15 166 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 ATP6V0E1O15342 81 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 HLA-DRB1P01911 266 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 CNTFRP26992 372 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 HTR2CP28335 458 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 SPHARQ15513 63 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 HSD17B12Q53GQ0 312 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 RNLSQ5VYX0 342 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 CEACAM19Q7Z692 300 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 OR11H1Q8NG94 326 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 SETD6Q8TBK2 473 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 ANKRD60Q9BZ19 345 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 KIAA1456Q9P272 454 aa16.42■□□□□ 0.22
VSX1-206ENST00000444511 G3V318 75 aa16.41■□□□□ 0.22
VSX1-206ENST00000444511 SRMP19623 302 aa16.41■□□□□ 0.22
VSX1-206ENST00000444511 PPIFP30405 207 aaKnown RBP16.41■□□□□ 0.22
VSX1-206ENST00000444511 FHL3Q13643 280 aa16.41■□□□□ 0.22
VSX1-206ENST00000444511 C5orf64Q2M2E5 130 aa16.41■□□□□ 0.22
VSX1-206ENST00000444511 LIN54Q6MZP7 749 aa16.41■□□□□ 0.22
VSX1-206ENST00000444511 SVOPQ8N4V2 548 aa16.41■□□□□ 0.22
VSX1-206ENST00000444511 UBE2E2Q96LR5 201 aa16.41■□□□□ 0.22
VSX1-206ENST00000444511 NICN1Q9BSH3 213 aa16.41■□□□□ 0.22
VSX1-206ENST00000444511 TM2D1Q9BX74 207 aa16.41■□□□□ 0.22
VSX1-206ENST00000444511 IFI27L2Q9H2X8 130 aa16.41■□□□□ 0.22
VSX1-206ENST00000444511 KCNK15Q9H427 330 aa16.41■□□□□ 0.22
VSX1-206ENST00000444511 IGHV7-81A0A0B4J1V7 117 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 TRAV41A0A0B4J266 112 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 ST8SIA5O15466 376 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 BLVRBP30043 206 aaPredicted RBP16.4■□□□□ 0.22
VSX1-206ENST00000444511 ECI1P42126 302 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 UNC119Q13432 240 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 MED22Q15528 200 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 FAM71F2Q6NXP2 309 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 MOB1BQ7L9L4 216 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 NPBQ8NG41 125 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 MYOZ3Q8TDC0 251 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 KLK15Q9H2R5 256 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 PLEKHJ1Q9NW61 149 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 SCN3BQ9NY72 215 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 PIPOXQ9P0Z9 390 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 VSIG4Q9Y279 399 aa16.4■□□□□ 0.22
VSX1-206ENST00000444511 LSM2Q9Y333 95 aaKnown RBP16.4■□□□□ 0.22
VSX1-206ENST00000444511 RAB29O14966 203 aa16.39■□□□□ 0.21
VSX1-206ENST00000444511 SLC22A1O15245 554 aa16.39■□□□□ 0.21
VSX1-206ENST00000444511 BPNT1O95861 308 aa16.39■□□□□ 0.21
VSX1-206ENST00000444511 NAPSAO96009 420 aa16.39■□□□□ 0.21
VSX1-206ENST00000444511 ZNF260Q3ZCT1 412 aa16.39■□□□□ 0.21
VSX1-206ENST00000444511 FAM131AQ6UXB0 335 aa16.39■□□□□ 0.21
VSX1-206ENST00000444511 ZNF491Q8N8L2 437 aa16.39■□□□□ 0.21
VSX1-206ENST00000444511 OR6M1Q8NGM8 313 aa16.39■□□□□ 0.21
VSX1-206ENST00000444511 PRR25Q96S07 402 aa16.39■□□□□ 0.21
VSX1-206ENST00000444511 GNB4Q9HAV0 340 aa16.39■□□□□ 0.21
VSX1-206ENST00000444511 COL7A1Q02388 2944 aa16.38■□□□□ 0.21
VSX1-206ENST00000444511 TMEM14DPA8MWL7 114 aa16.38■□□□□ 0.21
VSX1-206ENST00000444511 NDUFA3O95167 84 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms