RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 S100ZQ8WXG8 99 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 PEX11GQ96HA9 241 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 ST6GAL2Q96JF0 529 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 Q96MF0 132 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 RASL11BQ9BPW5 248 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 SYT3Q9BQG1 590 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 CABLES2Q9BTV7 478 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 EFCAB11Q9BUY7 163 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 GABARAPL3Q9BY60 117 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 REG4Q9BYZ8 158 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 ENY2Q9NPA8 101 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 ACOT13Q9NPJ3 140 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 AKIP1Q9NQ31 210 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 FAM206AQ9NX38 181 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 TAAR2Q9P1P5 351 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 ZNF230Q9UIE0 474 aaPredicted RBP4.65□□□□□ -1.66
RFC3-202ENST00000434425 CES1P1Q9UKY3 287 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 RAB22AQ9UL26 194 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 CHST2Q9Y4C5 530 aa4.65□□□□□ -1.66
RFC3-202ENST00000434425 SEC16AO15027 2179 aa4.65□□□□□ -1.67
RFC3-202ENST00000434425 NF1P21359 2839 aa4.65□□□□□ -1.67
RFC3-202ENST00000434425 HIVEP1P15822 2718 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 NIPBLQ6KC79 2804 aaeCLIP4.64□□□□□ -1.67
RFC3-202ENST00000434425 IGHV1OR21-1A0A087WYE8 117 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 A0A1B0GTH9 108 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 A1L4Q6 167 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 FAM74A7A6NL05 159 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 CLDN25C9JDP6 229 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 RNASET2O00584 256 aaKnown RBP4.64□□□□□ -1.67
RFC3-202ENST00000434425 MFNGO00587 321 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 IL18BPO95998 194 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 AMBPP02760 352 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 FABP3P05413 133 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 RFPL3SP0C7P2 107 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 SPTBP11277 2137 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 IL7P13232 177 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 TCN2P20062 427 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 AZU1P20160 251 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 RAB3BP20337 219 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 ETV6P41212 452 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 AVPR1BP47901 424 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 EMDP50402 254 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 HCCSP53701 268 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 HSPE1P61604 102 aaKnown RBP4.64□□□□□ -1.67
RFC3-202ENST00000434425 DCDP81605 110 aaKnown RBP4.64□□□□□ -1.67
RFC3-202ENST00000434425 CDK6Q00534 326 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 MYBPHQ13203 477 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 EBPQ15125 230 aaKnown RBP4.64□□□□□ -1.67
RFC3-202ENST00000434425 CDSNQ15517 529 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 SLC25A35Q3KQZ1 300 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 CD300EQ496F6 205 aaPredicted RBP4.64□□□□□ -1.67
RFC3-202ENST00000434425 CCSMST1Q4G0I0 132 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 FAM74A3Q4VXF1 159 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 NHLRC3Q5JS37 347 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 TMEM69Q5SWH9 247 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 FHL5Q5TD97 284 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 MRGPRGQ86SM5 289 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 BPIFB6Q8NFQ5 453 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 BEST4Q8NFU0 473 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 OR1L8Q8NGR8 309 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 DOK4Q8TEW6 326 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 SSC4DQ8WTU2 575 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 RND1Q92730 232 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 ZNF681Q96N22 645 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 GNRHR2Q96P88 292 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 IL17FQ96PD4 163 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 ZNF300Q96RE9 604 aaPredicted RBP4.64□□□□□ -1.67
RFC3-202ENST00000434425 CMSS1Q9BQ75 279 aaKnown RBP4.64□□□□□ -1.67
RFC3-202ENST00000434425 AGMATQ9BSE5 352 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 MLST8Q9BVC4 326 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 DPCDQ9BVM2 203 aaPredicted RBP4.64□□□□□ -1.67
RFC3-202ENST00000434425 C20orf85Q9H1P6 137 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 HRASLS2Q9NWW9 162 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 SCN3BQ9NY72 215 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 TAS2R16Q9NYV7 291 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 DOK5Q9P104 306 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 V9GYS6 101 aa4.64□□□□□ -1.67
RFC3-202ENST00000434425 A0A087WUU8 490 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 A0A1B0GX51 115 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 TMEM218A2RU14 115 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 TMEM189A5PLL7 270 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 ARRDC5A6NEK1 342 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 ZNF726A6NNF4 738 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 CEACAM18A8MTB9 384 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 FOXI3A8MTJ6 420 aaPredicted RBP4.63□□□□□ -1.67
RFC3-202ENST00000434425 E5RGE8 158 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 HMGB3O15347 200 aaKnown RBP4.63□□□□□ -1.67
RFC3-202ENST00000434425 OR7C2O60412 319 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 HPRT1P00492 218 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 IFNA7P01567 189 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 OPN1SWP03999 348 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 SNRPCP09234 159 aaKnown RBP4.63□□□□□ -1.67
RFC3-202ENST00000434425 SLC2A2P11168 524 aaPredicted RBP4.63□□□□□ -1.67
RFC3-202ENST00000434425 LAMP1P11279 417 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 CERS1P27544 350 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 CD34P28906 385 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 BRS3P32247 399 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 RPL3P39023 403 aaKnown RBP4.63□□□□□ -1.67
RFC3-202ENST00000434425 MNDAP41218 407 aa4.63□□□□□ -1.67
RFC3-202ENST00000434425 HMGA2P52926 109 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms