RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 FAM90A12PA8MX19 464 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM90A5PA8MXJ8 464 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 VSTM5A8MXK1 200 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM90A23PA8MXZ1 464 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 SNURFLB1AK76 121 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 C9JCJ5 164 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 H0YJW9 148 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 H7C1C5 153 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 DLL1O00548 723 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 SOCS1O15524 211 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 CST7O76096 145 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 GJB5O95377 273 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 HBZP02008 142 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 AMY1AP04745 511 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 SERPINE2P07093 398 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR9G9P0C7N8 305 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM90A15PP0C7V4 464 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM90A13PP0C7W8 464 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM90A14PP0C7W9 464 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM90A24PP0C7X0 464 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FABP2P12104 132 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 PGCP20142 388 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 MDKP21741 143 aaPredicted RBP4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 CCL1P22362 96 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 OPRM1P35372 400 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 CDKN1AP38936 164 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FLT3LGP49771 235 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 RAB9AP51151 201 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 TCTAP57738 103 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 RAC3P60763 192 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 NTHL1P78549 312 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 CCL7P80098 99 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 SSBP2P81877 361 aaPredicted RBP4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 TGFBR3Q03167 851 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 CXCL9Q07325 125 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 HSD52Q0P140 79 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 VGLL4Q14135 290 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 RTL8BQ17RB0 113 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 BVES-AS1Q5T3Y7 98 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 TMEM164Q5U3C3 297 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 ASPHD2Q6ICH7 369 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 TMEM211Q6ICI0 200 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 Q6ZS49 121 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 MRPL21Q7Z2W9 205 aaKnown RBP4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 NEGR1Q7Z3B1 354 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 BPIFA4PQ86YQ2 179 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 UEVLDQ8IX04 471 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 ST6GALNAC3Q8NDV1 305 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR10V1Q8NGI7 309 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR52M1Q8NGK5 317 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR1B1Q8NGR6 318 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 OR2A1Q8NGT9 310 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 ZPLD1Q8TCW7 415 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 TMEM171Q8WVE6 324 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 ZNRF4Q8WWF5 429 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 TAF15Q92804 592 aaKnown RBP eCLIP4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 LSM10Q969L4 123 aaKnown RBP4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 ADOQ96SZ5 270 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FAM103A1Q9BTL3 118 aaKnown RBP4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 DERL1Q9BUN8 251 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 TMEM147Q9BVK8 224 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 SFXN3Q9BWM7 321 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 VN1R3Q9BXE9 311 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 COMMD5Q9GZQ3 224 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 METTL7AQ9H8H3 244 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 STARD5Q9NSY2 213 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 IL36GQ9NZH8 169 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 RABAC1Q9UI14 185 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 ZNF391Q9UJN7 358 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 FBXL7Q9UJT9 491 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 B3GALT1Q9Y5Z6 326 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 HS3ST3A1Q9Y663 406 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 MYO10Q9HD67 2058 aa4.82□□□□□ -1.64
VTI1BP4-201ENST00000427516 COL4A2P08572 1712 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 MDC1Q14676 2089 aaKnown RBP4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 CENPVL1A0A0U1RR11 272 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 A0A1B0GTH9 108 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 A0A1W2PPV4 95 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 TMEM189A5PLL7 270 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 C9orf118A6NHY6 69 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 ANKRD30BLA7E2S9 258 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 CD300LBA8K4G0 201 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 SYNGR2O43760 224 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 CHST1O43916 411 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 GNG7O60262 68 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 ONECUT2O95948 504 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 CA2P00918 260 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 TTRP02766 147 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 CD55P08174 381 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 C3orf79P0CE67 100 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 GP1BBP13224 206 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 CEBPBP17676 345 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 AZU1P20160 251 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 USF1P22415 310 aaPredicted RBP4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 GDF1P27539 372 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 HTR1DP28221 377 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 S100A7P31151 101 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 SRD5A2P31213 254 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 TIMP3P35625 211 aa4.81□□□□□ -1.64
VTI1BP4-201ENST00000427516 RIPPLY3P57055 190 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms