RNA–Protein interactions for RNA: ENST00000427112.6

USP40-203, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP40, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-203ENST00000427112 NUFIP2Q7Z417 695 aaKnown RBP7.38□□□□□ -1.23
USP40-203ENST00000427112 OR4F5Q8NH21 305 aa7.38□□□□□ -1.23
USP40-203ENST00000427112 ZNF596Q8TC21 504 aa7.38□□□□□ -1.23
USP40-203ENST00000427112 RHBDD1Q8TEB9 315 aa7.38□□□□□ -1.23
USP40-203ENST00000427112 SSC4DQ8WTU2 575 aa7.38□□□□□ -1.23
USP40-203ENST00000427112 MISP3Q96FF7 219 aa7.38□□□□□ -1.23
USP40-203ENST00000427112 ABHD14BQ96IU4 210 aa7.38□□□□□ -1.23
USP40-203ENST00000427112 OR5B12Q96R08 314 aa7.38□□□□□ -1.23
USP40-203ENST00000427112 OR4F4Q96R69 305 aa7.38□□□□□ -1.23
USP40-203ENST00000427112 TM2D1Q9BX74 207 aa7.38□□□□□ -1.23
USP40-203ENST00000427112 RBKSQ9H477 322 aa7.38□□□□□ -1.23
USP40-203ENST00000427112 hCG_38984A0A1B0GV85 526 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 PGLYRP1O75594 196 aaPredicted RBP7.37□□□□□ -1.23
USP40-203ENST00000427112 CRYGSP22914 178 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 CEACAM6P40199 344 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 FADS6Q8N9I5 356 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 OR2V1Q8NHB1 315 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 SAP25Q8TEE9 199 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 LHX4Q969G2 390 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 FAM210BQ96KR6 192 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 TMEM68Q96MH6 324 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 KLF2Q9Y5W3 355 aaPredicted RBP7.37□□□□□ -1.23
USP40-203ENST00000427112 PQLC2LA1A4F0 135 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 NUDT19A8MXV4 375 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 DEGS1O15121 323 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 MPZP25189 248 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 CYB561P49447 251 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 FABP6P51161 128 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 EIF3IQ13347 325 aaKnown RBP7.37□□□□□ -1.23
USP40-203ENST00000427112 P2RY6Q15077 328 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 ODF3L1Q8IXM7 274 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 CNEP1R1Q8N9A8 125 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 CADM4Q8NFZ8 388 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 TMEM54Q969K7 222 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 SPSB1Q96BD6 273 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 ADGRG7Q96K78 797 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 SMIM7Q9BQ49 75 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 GINS3Q9BRX5 216 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 TAAR3PQ9P1P4 343 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 FOXD3Q9UJU5 478 aaPredicted RBP7.37□□□□□ -1.23
USP40-203ENST00000427112 A6NNC1 897 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 M0R143 59 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 UBE2CO00762 179 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 RAC3P60763 192 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 SLC35B1P78383 322 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 BAXQ07812 192 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 AESQ08117 197 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 ZNF266Q14584 549 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 MRPL14Q6P1L8 145 aaKnown RBP7.37□□□□□ -1.23
USP40-203ENST00000427112 DMRTC2Q8IXT2 367 aaPredicted RBP7.37□□□□□ -1.23
USP40-203ENST00000427112 TDHQ8IZJ6 230 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 OR52L2PQ8NGH6 319 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 ABHD5Q8WTS1 349 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 OR5P3Q8WZ94 311 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 MUCL1Q96DR8 90 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 UCK1Q9HA47 277 aa7.37□□□□□ -1.23
USP40-203ENST00000427112 CEP192Q8TEP8 1941 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 ZNF729A6NN14 1252 aaPredicted RBP7.36□□□□□ -1.23
USP40-203ENST00000427112 DVL1O14640 695 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 GAPDHP04406 335 aaKnown RBP7.36□□□□□ -1.23
USP40-203ENST00000427112 PAX6P26367 422 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 EDDM3BP56851 147 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 DAZAP2Q15038 168 aaPredicted RBP7.36□□□□□ -1.23
USP40-203ENST00000427112 TMEM41BQ5BJD5 291 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 GGNQ86UU5 652 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 CARFQ8N187 725 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 OR4D5Q8NGN0 318 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 MRGPRDQ8TDS7 321 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 IL22RA2Q969J5 263 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 TVP23CQ96ET8 276 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 OR4C12Q96R67 309 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 PCGF1Q9BSM1 259 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 SLC39A9Q9NUM3 307 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 ATP23Q9Y6H3 246 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 ZNF716A6NP11 495 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 C1QTNF9BB2RNN3 333 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 NXPH2O95156 264 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 MT-CO3P00414 261 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 LYL1P12980 280 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 THBS3P49746 956 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 HEPN1Q6WQI6 88 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 OR1L1Q8NH94 360 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 CLDN23Q96B33 292 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 FAM103A1Q9BTL3 118 aaKnown RBP7.36□□□□□ -1.23
USP40-203ENST00000427112 TMED3Q9Y3Q3 217 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 IGLV3-12A0A075B6K2 115 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 TRAV38-1A0A0B4J264 116 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 B4E171 279 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 RRP8O43159 456 aaKnown RBP7.36□□□□□ -1.23
USP40-203ENST00000427112 FGF7P21781 194 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 GABRA2P47869 451 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 OR3A1P47881 315 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 IL13RA2Q14627 380 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 ARL6IP1Q15041 203 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 SPEM1Q8N4L4 309 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 PLPPR1Q8TBJ4 325 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 IMMP1LQ96LU5 166 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 OR2J1Q9GZK6 312 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 OBP2BQ9NPH6 170 aa7.36□□□□□ -1.23
USP40-203ENST00000427112 FBLN5Q9UBX5 448 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms