RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ANKRD60Q9BZ19 345 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 PARP11Q9NR21 331 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 CHCHD3Q9NX63 227 aaKnown RBP11.51□□□□□ -0.57
RPS28-201ENST00000417088 KCNIP1Q9NZI2 227 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 JPT1Q9UK76 154 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 VSIG4Q9Y279 399 aa11.51□□□□□ -0.57
RPS28-201ENST00000417088 TRAV41A0A0B4J266 112 aa11.5□□□□□ -0.57
RPS28-201ENST00000417088 PNMA8CA0A1B0GUJ8 204 aa11.5□□□□□ -0.57
RPS28-201ENST00000417088 NBR2O15453 112 aa11.5□□□□□ -0.57
RPS28-201ENST00000417088 YPEL1O60688 119 aa11.5□□□□□ -0.57
RPS28-201ENST00000417088 PDCD6O75340 191 aa11.5□□□□□ -0.57
RPS28-201ENST00000417088 LY86O95711 162 aa11.5□□□□□ -0.57
RPS28-201ENST00000417088 RAB9AP51151 201 aa11.5□□□□□ -0.57
RPS28-201ENST00000417088 HTD2P86397 168 aa11.5□□□□□ -0.57
RPS28-201ENST00000417088 C5orf64Q2M2E5 130 aa11.5□□□□□ -0.57
RPS28-201ENST00000417088 DCUN1D4Q92564 292 aa11.5□□□□□ -0.57
RPS28-201ENST00000417088 GGHQ92820 318 aa11.5□□□□□ -0.57
RPS28-201ENST00000417088 YPEL2Q96QA6 119 aa11.5□□□□□ -0.57
RPS28-201ENST00000417088 SMAD5-AS1Q9Y6J3 95 aa11.5□□□□□ -0.57
RPS28-201ENST00000417088 C3orf84H3BNL1 204 aa11.49□□□□□ -0.57
RPS28-201ENST00000417088 BAG2O95816 211 aa11.49□□□□□ -0.57
RPS28-201ENST00000417088 BLVRBP30043 206 aaPredicted RBP11.49□□□□□ -0.57
RPS28-201ENST00000417088 CAPGP40121 348 aa11.49□□□□□ -0.57
RPS28-201ENST00000417088 OR3A3P47888 321 aa11.49□□□□□ -0.57
RPS28-201ENST00000417088 ST3GAL4Q11206 333 aa11.49□□□□□ -0.57
RPS28-201ENST00000417088 DOC2BQ14184 412 aa11.49□□□□□ -0.57
RPS28-201ENST00000417088 LY6G6FQ5SQ64 297 aa11.49□□□□□ -0.57
RPS28-201ENST00000417088 C6orf141Q5SZD1 244 aa11.49□□□□□ -0.57
RPS28-201ENST00000417088 LIN54Q6MZP7 749 aa11.49□□□□□ -0.57
RPS28-201ENST00000417088 ZNF833PQ6ZTB9 187 aa11.49□□□□□ -0.57
RPS28-201ENST00000417088 MINDY2Q8NBR6 621 aa11.49□□□□□ -0.57
RPS28-201ENST00000417088 NPBQ8NG41 125 aa11.49□□□□□ -0.57
RPS28-201ENST00000417088 NDUFA3O95167 84 aa11.48□□□□□ -0.57
RPS28-201ENST00000417088 TAS2R43P59537 309 aa11.48□□□□□ -0.57
RPS28-201ENST00000417088 C19orf54Q5BKX5 351 aa11.48□□□□□ -0.57
RPS28-201ENST00000417088 TTC23Q5W5X9 447 aa11.48□□□□□ -0.57
RPS28-201ENST00000417088 ZNF429Q86V71 674 aa11.48□□□□□ -0.57
RPS28-201ENST00000417088 NKAIN3Q8N8D7 197 aa11.48□□□□□ -0.57
RPS28-201ENST00000417088 CYGBQ8WWM9 190 aa11.48□□□□□ -0.57
RPS28-201ENST00000417088 FAM46BQ96A09 425 aa11.48□□□□□ -0.57
RPS28-201ENST00000417088 GALMQ96C23 342 aa11.48□□□□□ -0.57
RPS28-201ENST00000417088 UQCC2Q9BRT2 126 aa11.48□□□□□ -0.57
RPS28-201ENST00000417088 ALX4Q9H161 411 aaPredicted RBP11.48□□□□□ -0.57
RPS28-201ENST00000417088 ISYNA1Q9NPH2 558 aa11.48□□□□□ -0.57
RPS28-201ENST00000417088 FBXO7Q9Y3I1 522 aa11.48□□□□□ -0.57
RPS28-201ENST00000417088 RYR2Q92736 4967 aa11.48□□□□□ -0.57
RPS28-201ENST00000417088 SAA2-SAA4A0A096LPE2 208 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 EFCAB10A6NFE3 127 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 OVOL1O14753 267 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 SOX15O60248 233 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 RGS11O94810 467 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 CD1AP06126 327 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 SAA2P0DJI9 122 aaPredicted RBP11.47□□□□□ -0.57
RPS28-201ENST00000417088 CELP19835 753 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 CRIP2P52943 208 aaPredicted RBP11.47□□□□□ -0.57
RPS28-201ENST00000417088 NDPQ00604 133 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 HMGN3Q15651 99 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 LRRC36Q1X8D7 754 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 SBSPONQ8IVN8 264 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 SETD9Q8NE22 299 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 DLX4Q92988 240 aaPredicted RBP11.47□□□□□ -0.57
RPS28-201ENST00000417088 SULT4A1Q9BR01 284 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 FAAP24Q9BTP7 215 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 IFI27L2Q9H2X8 130 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 KIAA1456Q9P272 454 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 GHRLQ9UBU3 117 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 LRRC42Q9Y546 428 aa11.47□□□□□ -0.57
RPS28-201ENST00000417088 DYNC2H1Q8NCM8 4307 aaKnown RBP11.46□□□□□ -0.57
RPS28-201ENST00000417088 DNAH7Q8WXX0 4024 aa11.46□□□□□ -0.57
RPS28-201ENST00000417088 SLURP1P55000 103 aa11.46□□□□□ -0.57
RPS28-201ENST00000417088 CX3CL1P78423 397 aa11.46□□□□□ -0.57
RPS28-201ENST00000417088 ECSCRQ19T08 205 aa11.46□□□□□ -0.57
RPS28-201ENST00000417088 FAM27D1Q5T7N8 215 aa11.46□□□□□ -0.57
RPS28-201ENST00000417088 ZNF660Q6AZW8 331 aaPredicted RBP11.46□□□□□ -0.57
RPS28-201ENST00000417088 FAM131AQ6UXB0 335 aa11.46□□□□□ -0.57
RPS28-201ENST00000417088 OR2AK2Q8NG84 335 aa11.46□□□□□ -0.57
RPS28-201ENST00000417088 NEDD4LQ96PU5 975 aa11.46□□□□□ -0.57
RPS28-201ENST00000417088 CST11Q9H112 138 aa11.46□□□□□ -0.57
RPS28-201ENST00000417088 FBXL15Q9H469 300 aa11.46□□□□□ -0.57
RPS28-201ENST00000417088 TPSG1Q9NRR2 321 aa11.46□□□□□ -0.57
RPS28-201ENST00000417088 A0A1W2PN81 502 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 LINC01619G3V211 115 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 RRHO14718 337 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 ST8SIA5O15466 376 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 SAP30O75446 220 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 EGR2P11161 476 aaPredicted RBP11.45□□□□□ -0.58
RPS28-201ENST00000417088 SPNP16150 400 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 CHRNA7P36544 502 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 WNT4P56705 351 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 INSL4Q14641 139 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 RPL39P5Q59GN2 51 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 OR10K2Q6IF99 312 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 LAIR2Q6ISS4 152 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 FAM71F2Q6NXP2 309 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 C6orf201Q7Z4U5 140 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 DHRSXQ8N5I4 330 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 CASTOR1Q8WTX7 329 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 IL1F10Q8WWZ1 152 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 TOLLIPQ9H0E2 274 aa11.45□□□□□ -0.58
RPS28-201ENST00000417088 CNOT2Q9NZN8 540 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms