RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ING3Q9NXR8 418 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 PLA2G2EQ9NZK7 142 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 SLC23A1Q9UHI7 598 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 ETV7Q9Y603 341 aa5.11□□□□□ -1.59
USP54-202ENST00000413442 OR5H14A6NHG9 310 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 AP4M1O00189 453 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 ST8SIA5O15466 376 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 HSPA12AO43301 675 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 RRP9O43818 475 aaKnown RBP5.1□□□□□ -1.59
USP54-202ENST00000413442 CHST1O43916 411 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 TPPPO94811 219 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 SNRNP70P08621 437 aaKnown RBP5.1□□□□□ -1.59
USP54-202ENST00000413442 RRASP10301 218 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 DTYMKP23919 212 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 PSMB9P28065 219 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 TALDO1P37837 337 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 BLCAPP62952 87 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 PRB3Q04118 309 aaPredicted RBP5.1□□□□□ -1.59
USP54-202ENST00000413442 HES1Q14469 280 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 INSL4Q14641 139 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 NKAPLQ5M9Q1 402 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 C6orf201Q7Z4U5 140 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 DRAM1Q8N682 238 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 Q8N6K4 173 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 KLHDC1Q8N7A1 406 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 C5orf56Q8N8D9 126 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 TSPAN14Q8NG11 270 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 OR5AU1Q8NGC0 362 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 SGCDQ92629 289 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 KCTD12Q96CX2 325 aaKnown RBP5.1□□□□□ -1.59
USP54-202ENST00000413442 ADTRPQ96IZ2 230 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 EAF1Q96JC9 268 aaPredicted RBP5.1□□□□□ -1.59
USP54-202ENST00000413442 RASL11BQ9BPW5 248 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 ABHD14AQ9BUJ0 271 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 PECRQ9BY49 303 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 GPR61Q9BZJ8 451 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 ABCG5Q9H222 651 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 DIABLOQ9NR28 239 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 ZNF221Q9UK13 617 aa5.1□□□□□ -1.59
USP54-202ENST00000413442 TSSC4Q9Y5U2 329 aaPredicted RBP5.1□□□□□ -1.59
USP54-202ENST00000413442 TMEM272A0A1B0GTI8 110 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 MEX3AA1L020 520 aaKnown RBP5.09□□□□□ -1.59
USP54-202ENST00000413442 TRIM64CA6NLI5 447 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 RAB27BO00194 218 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 ARPC1BO15143 372 aaKnown RBP5.09□□□□□ -1.59
USP54-202ENST00000413442 SOCS1O15524 211 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 IGKV1D-33P01593 117 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 IGKV1-33P01594 117 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 IGF1P05019 195 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 VSIG10L2P0DP72 767 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 HIST1H1DP16402 221 aaKnown RBP5.09□□□□□ -1.59
USP54-202ENST00000413442 CD36P16671 472 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 CEACAM6P40199 344 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 CBX5P45973 191 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 LGALS7P47929 136 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 GNG10P50151 68 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 ZNF134P52741 427 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 HLA-DRB3P79483 266 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 TMEM267Q0VDI3 215 aaPredicted RBP5.09□□□□□ -1.59
USP54-202ENST00000413442 ABCA11PQ4W5N1 156 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 ZNF660Q6AZW8 331 aaPredicted RBP5.09□□□□□ -1.59
USP54-202ENST00000413442 C22orf42Q6IC83 251 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 OR10K2Q6IF99 312 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 TEX38Q6PEX7 206 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 ZNF833PQ6ZTB9 187 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 REC114Q7Z4M0 266 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 SLC35E3Q7Z769 313 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 TMEM219Q86XT9 240 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 LYG1Q8N1E2 194 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 PRR18Q8N4B5 295 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 TCTEX1D1Q8N7M0 179 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 WFDC9Q8NEX5 89 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 NPBQ8NG41 125 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 OR56B4Q8NH76 319 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 OR10J5Q8NHC4 309 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 BORCS5Q969J3 196 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 TMEM68Q96MH6 324 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 GFI1Q99684 422 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 AIFM2Q9BRQ8 373 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 AGMATQ9BSE5 352 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 KIAA1456Q9P272 454 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 RNF150Q9ULK6 438 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 SPATA2Q9UM82 520 aa5.09□□□□□ -1.59
USP54-202ENST00000413442 TENM1Q9UKZ4 2725 aa5.09□□□□□ -1.6
USP54-202ENST00000413442 TRBV6-7A0A0A0MS04 114 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 TRAV39A0A0B4J263 110 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 PSMB11A5LHX3 300 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 NCBP2LA6PVI3 153 aaKnown RBP5.08□□□□□ -1.6
USP54-202ENST00000413442 MFNGO00587 321 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 SPDEFO95238 335 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 AMY1AP04745 511 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 AMY2AP04746 511 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 ELANEP08246 267 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 CD40LGP29965 261 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 SOX6P35712 828 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 CBX3Q13185 183 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 LSAMPQ13449 338 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 ARFRP1Q13795 201 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 MSMO1Q15800 293 aa5.08□□□□□ -1.6
USP54-202ENST00000413442 LTC4SQ16873 150 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms