RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SHISA3A0PJX4 238 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 SERPINE3A8MV23 424 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 TXNL1O43396 289 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 YPEL1O60688 119 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 F2RL1P55085 397 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 PLA2G7Q13093 441 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 C2orf76Q3KRA6 126 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 OXLD1Q5BKU9 147 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 LY6G6FQ5SQ64 297 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 FAM3DQ96BQ1 224 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 YPEL2Q96QA6 119 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 HDHD3Q9BSH5 251 aaPredicted RBP13.98□□□□□ -0.17
LSM5-204ENST00000409909 URM1Q9BTM9 101 aaKnown RBP13.98□□□□□ -0.17
LSM5-204ENST00000409909 NDUFB11Q9NX14 153 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 AK3Q9UIJ7 227 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 V9GY05 133 aa13.98□□□□□ -0.17
LSM5-204ENST00000409909 LDLRAD4O15165 306 aa13.97□□□□□ -0.17
LSM5-204ENST00000409909 OR3A3P47888 321 aa13.97□□□□□ -0.17
LSM5-204ENST00000409909 LSAMPQ13449 338 aa13.97□□□□□ -0.17
LSM5-204ENST00000409909 CD200R1LQ6Q8B3 271 aa13.97□□□□□ -0.17
LSM5-204ENST00000409909 SLC35E3Q7Z769 313 aa13.97□□□□□ -0.17
LSM5-204ENST00000409909 WFDC9Q8NEX5 89 aa13.97□□□□□ -0.17
LSM5-204ENST00000409909 CHPT1Q8WUD6 406 aa13.97□□□□□ -0.17
LSM5-204ENST00000409909 IL1F10Q8WWZ1 152 aa13.97□□□□□ -0.17
LSM5-204ENST00000409909 S1PR3Q99500 378 aa13.97□□□□□ -0.17
LSM5-204ENST00000409909 ABCG5Q9H222 651 aa13.97□□□□□ -0.17
LSM5-204ENST00000409909 CHMP1AQ9HD42 196 aaPredicted RBP13.97□□□□□ -0.17
LSM5-204ENST00000409909 LIN7CQ9NUP9 197 aaKnown RBP13.97□□□□□ -0.17
LSM5-204ENST00000409909 HSF4Q9ULV5 492 aa13.97□□□□□ -0.17
LSM5-204ENST00000409909 TRBV6-6A0A0A6YYG2 114 aa13.96□□□□□ -0.17
LSM5-204ENST00000409909 TRAV1-2A0A0B4J238 106 aa13.96□□□□□ -0.17
LSM5-204ENST00000409909 GPR12P47775 334 aa13.96□□□□□ -0.17
LSM5-204ENST00000409909 VEGFCP49767 419 aa13.96□□□□□ -0.17
LSM5-204ENST00000409909 OR10A3P58181 314 aa13.96□□□□□ -0.17
LSM5-204ENST00000409909 GABARAPL2P60520 117 aa13.96□□□□□ -0.17
LSM5-204ENST00000409909 HES5Q5TA89 166 aa13.96□□□□□ -0.17
LSM5-204ENST00000409909 FAM71E2Q8N5Q1 922 aa13.96□□□□□ -0.17
LSM5-204ENST00000409909 SETD6Q8TBK2 473 aa13.96□□□□□ -0.17
LSM5-204ENST00000409909 ARHGAP5-AS1Q96IT6 56 aa13.96□□□□□ -0.17
LSM5-204ENST00000409909 RITA1Q96K30 269 aa13.96□□□□□ -0.17
LSM5-204ENST00000409909 MRPL20Q9BYC9 149 aaKnown RBP13.96□□□□□ -0.17
LSM5-204ENST00000409909 PARP12Q9H0J9 701 aaKnown RBP13.96□□□□□ -0.17
LSM5-204ENST00000409909 ABRACLQ9P1F3 81 aa13.96□□□□□ -0.17
LSM5-204ENST00000409909 TMEM272A0A1B0GTI8 110 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 DENRO43583 198 aaKnown RBP13.95□□□□□ -0.18
LSM5-204ENST00000409909 RGS11O94810 467 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 PRB2P02812 416 aaPredicted RBP13.95□□□□□ -0.18
LSM5-204ENST00000409909 PF4V1P10720 104 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 PSMD7P51665 324 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 KHDC1LQ5JSQ8 128 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 PLAC9Q5JTB6 97 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 ZNF833PQ6ZTB9 187 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 SPARTQ8N0X7 666 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 STPG2Q8N412 459 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 OR2AK2Q8NG84 335 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 OR8H1Q8NGG4 311 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 NABP2Q9BQ15 211 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 PECRQ9BY49 303 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 IFI27L2Q9H2X8 130 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 RIMS4Q9H426 269 aaPredicted RBP13.95□□□□□ -0.18
LSM5-204ENST00000409909 STEAP1Q9UHE8 339 aa13.95□□□□□ -0.18
LSM5-204ENST00000409909 SAA2-SAA4A0A096LPE2 208 aa13.94□□□□□ -0.18
LSM5-204ENST00000409909 TRDV1A0A1B0GX56 115 aa13.94□□□□□ -0.18
LSM5-204ENST00000409909 ST8SIA5O15466 376 aa13.94□□□□□ -0.18
LSM5-204ENST00000409909 MRPS14O60783 128 aaKnown RBP13.94□□□□□ -0.18
LSM5-204ENST00000409909 SAA2P0DJI9 122 aaPredicted RBP13.94□□□□□ -0.18
LSM5-204ENST00000409909 UBE2UQ5VVX9 321 aa13.94□□□□□ -0.18
LSM5-204ENST00000409909 C18orf65Q6ZTR6 163 aa13.94□□□□□ -0.18
LSM5-204ENST00000409909 MOB1BQ7L9L4 216 aa13.94□□□□□ -0.18
LSM5-204ENST00000409909 FOXRED2Q8IWF2 684 aa13.94□□□□□ -0.18
LSM5-204ENST00000409909 RASL11BQ9BPW5 248 aa13.94□□□□□ -0.18
LSM5-204ENST00000409909 HSPB9Q9BQS6 159 aa13.94□□□□□ -0.18
LSM5-204ENST00000409909 ZNF251Q9BRH9 671 aa13.94□□□□□ -0.18
LSM5-204ENST00000409909 Q9N2K0 584 aa13.94□□□□□ -0.18
LSM5-204ENST00000409909 IGLL1P15814 213 aa13.93□□□□□ -0.18
LSM5-204ENST00000409909 CD33P20138 364 aa13.93□□□□□ -0.18
LSM5-204ENST00000409909 RPL23AP62750 156 aaKnown RBP13.93□□□□□ -0.18
LSM5-204ENST00000409909 NR2C2APQ86WQ0 139 aa13.93□□□□□ -0.18
LSM5-204ENST00000409909 OR56B1Q8NGI3 324 aa13.93□□□□□ -0.18
LSM5-204ENST00000409909 OR1A1Q9P1Q5 309 aa13.93□□□□□ -0.18
LSM5-204ENST00000409909 SLC23A1Q9UHI7 598 aa13.93□□□□□ -0.18
LSM5-204ENST00000409909 RAB22AQ9UL26 194 aa13.93□□□□□ -0.18
LSM5-204ENST00000409909 KCNK7Q9Y2U2 307 aa13.93□□□□□ -0.18
LSM5-204ENST00000409909 IFITM5A6NNB3 132 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 AP4M1O00189 453 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 PDCD5O14737 125 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 PF4P02776 101 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 SCTP09683 121 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 GALP22466 123 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 CNTFRP26992 372 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 HLA-DRB3P79483 266 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 MOGAT2Q3SYC2 334 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 RPL39P5Q59GN2 51 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 C22orf42Q6IC83 251 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 ETV3LQ6ZN32 361 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 PHF21AQ96BD5 680 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 AGMATQ9BSE5 352 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 C12orf4Q9NQ89 552 aa13.92□□□□□ -0.18
LSM5-204ENST00000409909 A0A0B4J203 849 aa13.91□□□□□ -0.18
LSM5-204ENST00000409909 IGKV1-6A0A0C4DH72 117 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms