RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 BLVRBP30043 206 aaPredicted RBP11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 VHLP40337 213 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 REG1BP48304 166 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 QRFPP83859 136 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 INSL4Q14641 139 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 PNLIPRP3Q17RR3 467 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 NKAPLQ5M9Q1 402 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 FAM27D1Q5T7N8 215 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 FAM71F2Q6NXP2 309 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 STPG2Q8N412 459 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 SVOPQ8N4V2 548 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 Q8N9W7 124 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 S1PR3Q99500 378 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 MGLLQ99685 303 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 FAAP24Q9BTP7 215 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 ABHD14AQ9BUJ0 271 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 MCRIP2Q9BUT9 160 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 CCDC90BQ9GZT6 254 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 PLGRKTQ9HBL7 147 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 PIPOXQ9P0Z9 390 aa11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 ZMAT5Q9UDW3 170 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-205ENST00000409588 A0A1W2PRX2 142 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 SH2D7A6NKC9 451 aaPredicted RBP11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 NAPSAO96009 420 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 OR5H8P0DN80 308 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 SOX6P35712 828 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 GPR12P47775 334 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 HMGN3Q15651 99 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 OXLD1Q5BKU9 147 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 HIST2H2BDQ6DRA6 164 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 ZNF880Q6PDB4 577 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 TMEM91Q6ZNR0 172 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 OR2AK2Q8NG84 335 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 OR10V1Q8NGI7 309 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 UBALD1Q8TB05 177 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 TMEM203Q969S6 136 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 SULT4A1Q9BR01 284 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 CENPOQ9BU64 300 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 RAB26Q9ULW5 256 aa11.48□□□□□ -0.57
NIF3L1-205ENST00000409588 RAB29O14966 203 aa11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 SLC31A2O15432 143 aa11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 IGF1P05019 195 aa11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 ELANEP08246 267 aa11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 GALP22466 123 aa11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 MYCNOSP40205 109 aa11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 RPL23AP62750 156 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 UNC119Q13432 240 aa11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 KHDC1LQ5JSQ8 128 aa11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 OR10K2Q6IF99 312 aa11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 C6orf201Q7Z4U5 140 aa11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 ZNF329Q86UD4 541 aa11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 FAM71E2Q8N5Q1 922 aa11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 V9GY05 133 aa11.47□□□□□ -0.57
NIF3L1-205ENST00000409588 NOTCH3Q9UM47 2321 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 IGHV3-72A0A0B4J1Y9 119 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 PDCD5O14737 125 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 ZBTB25P24278 435 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 MC5RP33032 325 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 LSAMPQ13449 338 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 FOXE3Q13461 319 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 TBCEQ15813 527 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 RAB11BQ15907 218 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 ZNF833PQ6ZTB9 187 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 RNF152Q8N8N0 203 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 OR52L2PQ8NGH6 319 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 OR56B1Q8NGI3 324 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 EDARADDQ8WWZ3 215 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 PHF21AQ96BD5 680 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 NOL4LQ96MY1 436 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 RNF5Q99942 180 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 LPAR5Q9H1C0 372 aa11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 CHMP1AQ9HD42 196 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-205ENST00000409588 TRAV1-2A0A0B4J238 106 aa11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 CALRP27797 417 aaKnown RBP11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 PPP1CCP36873 323 aaKnown RBP11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 CDX1P47902 265 aaPredicted RBP11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 THBS3P49746 956 aa11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 C2orf76Q3KRA6 126 aa11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 CXorf66Q5JRM2 361 aaPredicted RBP11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 C10orf99Q6UWK7 81 aa11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 IZUMO2Q6UXV1 221 aa11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 ZNF367Q7RTV3 350 aa11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 ZNF695Q8IW36 515 aa11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 ODF3L1Q8IXM7 274 aa11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 FAM3DQ96BQ1 224 aa11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 ZNF251Q9BRH9 671 aa11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 SLC23A1Q9UHI7 598 aa11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 RAB22AQ9UL26 194 aa11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 AK6Q9Y3D8 172 aaKnown RBP11.45□□□□□ -0.58
NIF3L1-205ENST00000409588 ZNF736B4DX44 427 aaPredicted RBP11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 IGLL1P15814 213 aa11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 VDAC1P21796 283 aa11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 F2RL1P55085 397 aa11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 RPS25P62851 125 aaKnown RBP11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 FABP5Q01469 135 aa11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 FOXB2Q5VYV0 432 aa11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 FAM53AQ6NSI3 398 aaPredicted RBP11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 LINC00482Q8N8I6 264 aa11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 NPBQ8NG41 125 aa11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 IL1F10Q8WWZ1 152 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms