RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 HEPN1Q6WQI6 88 aa16.8■□□□□ 0.28
VCPKMT-202ENST00000395860 SGPP2Q8IWX5 399 aa16.8■□□□□ 0.28
VCPKMT-202ENST00000395860 CMTM1Q8IZ96 169 aa16.8■□□□□ 0.28
VCPKMT-202ENST00000395860 CHAC2Q8WUX2 184 aa16.8■□□□□ 0.28
VCPKMT-202ENST00000395860 DNASE1P24855 282 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 DSCR9P59020 149 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 CD276Q5ZPR3 534 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 OR2AK2Q8NG84 335 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 CASTOR1Q8WTX7 329 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 RTN4IP1Q8WWV3 396 aaPredicted RBP16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 OR2D2Q9H210 308 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 CRYM-AS1A6NIL9 109 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 SFT2D2O95562 160 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 IGHV3-7P01780 117 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 S100GP29377 79 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 DLX6P56179 175 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 ERVFRD-1P60508 538 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 C11orf88Q6PI97 169 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 RAB39BQ96DA2 213 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 BEX4Q9NWD9 120 aaPredicted RBP16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 RNF150Q9ULK6 438 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 PSG11Q9UQ72 335 aa16.79■□□□□ 0.28
VCPKMT-202ENST00000395860 ARID1AO14497 2285 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 HELZ2Q9BYK8 2649 aaKnown RBP16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 MALRD1Q5VYJ5 2156 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 LOC105371242A0A075B767 164 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 VWC2LB2RUY7 222 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 C22orf46C9J442 243 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 ST8SIA5O15466 376 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 TRAPPC2P0DI81 140 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 TRAPPC2BP0DI82 140 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 SUPT4H1P63272 117 aaKnown RBP16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 SLC9A3R2Q15599 337 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 C11orf91Q3C1V1 193 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 UXS1Q8NBZ7 420 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 BVESQ8NE79 360 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 LEAP2Q969E1 77 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 AKR1E2Q96JD6 320 aa16.78■□□□□ 0.28
VCPKMT-202ENST00000395860 LIPFP07098 398 aa16.77■□□□□ 0.28
VCPKMT-202ENST00000395860 RND3P61587 244 aa16.77■□□□□ 0.28
VCPKMT-202ENST00000395860 LMO4P61968 165 aa16.77■□□□□ 0.28
VCPKMT-202ENST00000395860 C12orf45Q8N5I9 185 aaPredicted RBP16.77■□□□□ 0.28
VCPKMT-202ENST00000395860 ZNF645Q8N7E2 425 aa16.77■□□□□ 0.28
VCPKMT-202ENST00000395860 LY6G5BQ8NDX9 201 aa16.77■□□□□ 0.28
VCPKMT-202ENST00000395860 FAM216AQ8WUB2 273 aa16.77■□□□□ 0.28
VCPKMT-202ENST00000395860 NAA60Q9H7X0 242 aa16.77■□□□□ 0.28
VCPKMT-202ENST00000395860 KCNIP3Q9Y2W7 256 aa16.77■□□□□ 0.28
VCPKMT-202ENST00000395860 IGHV4-30-2A0A087WSY4 118 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 C17orf98A8MV24 154 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 MPPED1O15442 326 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 TNFSF12O43508 249 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 DUS4LO95620 317 aaKnown RBP16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 IGLV2-14P01704 120 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 CD34P28906 385 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 FCN2Q15485 313 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 DEFB113Q30KQ7 82 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 LY6G6FQ5SQ64 297 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 UTF1Q5T230 341 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 TBC1D26Q86UD7 250 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 AKAP14Q86UN6 197 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 PHB2Q99623 299 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 ABHD14AQ9BUJ0 271 aa16.77■□□□□ 0.27
VCPKMT-202ENST00000395860 FBN2P35556 2912 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 ITGB1BP1O14713 200 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 SLC22A5O76082 557 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 IFNA2P01563 188 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 IGHV1-8P0DP01 117 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 GNG10P50151 68 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 RAB7AP51149 207 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 ZNF134P52741 427 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 CLEC12BQ2HXU8 276 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 DRAM1Q8N682 238 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 MITD1Q8WV92 249 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 ABHD14BQ96IU4 210 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 AGMATQ9BSE5 352 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 ONECUT1Q9UBC0 465 aa16.76■□□□□ 0.27
VCPKMT-202ENST00000395860 A0A1W2PPE3 182 aa16.75■□□□□ 0.27
VCPKMT-202ENST00000395860 KIAA1324LA8MWY0 1029 aaPredicted RBP16.75■□□□□ 0.27
VCPKMT-202ENST00000395860 PGLYRP1O75594 196 aaPredicted RBP16.75■□□□□ 0.27
VCPKMT-202ENST00000395860 ANXA3P12429 323 aa16.75■□□□□ 0.27
VCPKMT-202ENST00000395860 C11orf42Q8N5U0 333 aa16.75■□□□□ 0.27
VCPKMT-202ENST00000395860 ZBTB34Q8NCN2 500 aa16.75■□□□□ 0.27
VCPKMT-202ENST00000395860 ZNF439Q8NDP4 499 aa16.75■□□□□ 0.27
VCPKMT-202ENST00000395860 GPHA2Q96T91 129 aa16.75■□□□□ 0.27
VCPKMT-202ENST00000395860 NEURL2Q9BR09 285 aa16.75■□□□□ 0.27
VCPKMT-202ENST00000395860 SUCNR1Q9BXA5 334 aa16.75■□□□□ 0.27
VCPKMT-202ENST00000395860 IGHV4-61A0A0C4DH41 118 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 hCG_1809904A0A1W2PP81 198 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 A0A1W2PPE2 198 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 A0A1W2PR64 198 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 A0A1W2PRV1 198 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 A8MXK9 166 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 SLC31A2O15432 143 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 CCNKO75909 580 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 ZFP36P26651 326 aaKnown RBP16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 GPR12P47775 334 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 CT45A1Q5HYN5 189 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 LIN54Q6MZP7 749 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 LRRC75A-AS1Q8N1F1 130 aa16.74■□□□□ 0.27
VCPKMT-202ENST00000395860 OR11H7Q8NGC8 314 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms