RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 ZNF32P17041 273 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 DUSP3P51452 185 aaPredicted RBP14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 SPATA46Q5T0L3 261 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 LHFPL2Q6ZUX7 228 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 GBGT1Q8N5D6 347 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 TPPP3Q9BW30 176 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 SPTBN2O15020 2390 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 LIPT2A6NK58 231 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 C3orf80F5H4A9 247 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 FAM90A2PQ658T7 463 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 FGF14Q92915 247 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 LAMTOR2Q9Y2Q5 125 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 DEGS1O15121 323 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 SNAI2O43623 268 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 TMEM11P17152 192 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 GZMHP20718 246 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 TIGITQ495A1 244 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 CYP2G1PQ6ZSU1 146 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 NLRC5Q86WI3 1866 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 CLDN23Q96B33 292 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 TBX21Q9UL17 535 aa14.65□□□□□ -0.06
TRAF3IP1-202ENST00000391993 CXorf51AA0A1B0GTR3 108 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 LNP1A1A4G5 178 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 DEFB108AA8MXU0 73 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 RRP8O43159 456 aaKnown RBP14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 TNFSF14O43557 240 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 GALR2O43603 387 aaPredicted RBP14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 TAF15Q92804 592 aaKnown RBP eCLIP14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 SPSB1Q96BD6 273 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 MRGPRX1Q96LB2 322 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 ZNF385AQ96PM9 386 aaKnown RBP14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 COL9A1P20849 921 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 ADMP35318 185 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 PLA2G5P39877 138 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 UQCRFS1P47985 274 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 GABRA6Q16445 453 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 OR1N1Q8NGS0 311 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 MOB3AQ96BX8 217 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 MSI2Q96DH6 328 aaKnown RBP14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 HIPK2Q9H2X6 1198 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 SPTBN1Q01082 2364 aaKnown RBP14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 TOX4O94842 621 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 SYNGR4O95473 234 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 DCAF10Q5QP82 559 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 ANGPTL4Q9BY76 406 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 C5orf42Q9H799 3197 aa14.64□□□□□ -0.07
TRAF3IP1-202ENST00000391993 M0QZ24 198 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 GRPP07492 148 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 TBL2Q9Y4P3 447 aaKnown RBP14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 M0R2Z0 102 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 CDKN1AP38936 164 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 TSPAN7P41732 249 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 EDDM3AQ14507 147 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 Q96M66 194 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 LIME1Q9H400 295 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 FSCN3Q9NQT6 498 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 CTXND1A0A1B0GTU2 59 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 CSN3P07498 182 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 CD99P14209 185 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 CA6P23280 308 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 CD38P28907 300 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 G6PCP35575 357 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 USF3Q68DE3 2245 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 C5orf49A4QMS7 147 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 ZFAND5O76080 213 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 NAPSAO96009 420 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 LYL1P12980 280 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 USF1P22415 310 aaPredicted RBP14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 ATP5G3P48201 142 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 OR5B3Q8NH48 314 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 RNASE8Q8TDE3 154 aaKnown RBP14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 CDCA3Q99618 268 aaPredicted RBP14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 PLA2G2FQ9BZM2 168 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 B3GAT1Q9P2W7 334 aa14.63□□□□□ -0.07
TRAF3IP1-202ENST00000391993 MT-CO2P00403 227 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 BRS3P32247 399 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 SPTA1P02549 2419 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 ANKRD30BLA7E2S9 258 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 TNFSF11O14788 317 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 BCL3P20749 454 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 QRFPP83859 136 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 RAB31Q13636 194 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 CEACAM16Q2WEN9 425 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 OR4B1Q8NGF8 309 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 NXPH2O95156 264 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 F2RP25116 425 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 LCN12Q6JVE5 192 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 DERL1Q9BUN8 251 aa14.62□□□□□ -0.07
TRAF3IP1-202ENST00000391993 IGHV3-43A0A0B4J1X8 118 aa14.61□□□□□ -0.07
TRAF3IP1-202ENST00000391993 BMPR1BO00238 502 aa14.61□□□□□ -0.07
TRAF3IP1-202ENST00000391993 DUX1O43812 170 aa14.61□□□□□ -0.07
TRAF3IP1-202ENST00000391993 IGHV3-43DP0DP04 118 aa14.61□□□□□ -0.07
TRAF3IP1-202ENST00000391993 SRIP30626 198 aa14.61□□□□□ -0.07
TRAF3IP1-202ENST00000391993 CEACAM8P31997 349 aaPredicted RBP14.61□□□□□ -0.07
TRAF3IP1-202ENST00000391993 GALNSP34059 522 aa14.61□□□□□ -0.07
TRAF3IP1-202ENST00000391993 CEACAM6P40199 344 aa14.61□□□□□ -0.07
TRAF3IP1-202ENST00000391993 PRAMEF5Q5TYX0 476 aa14.61□□□□□ -0.07
TRAF3IP1-202ENST00000391993 PRAMEF6Q5VXH4 476 aa14.61□□□□□ -0.07
TRAF3IP1-202ENST00000391993 IGKV1D-13A0A0B4J2D9 117 aa14.61□□□□□ -0.07
TRAF3IP1-202ENST00000391993 LINC00614P0C842 121 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms