RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 FAAP20Q6NZ36 180 aa6.2□□□□□ -1.42
CCDC171-201ENST00000380701 MRPS16Q9Y3D3 137 aaKnown RBP6.2□□□□□ -1.42
CCDC171-201ENST00000380701 MT-ND6P03923 174 aa6.2□□□□□ -1.42
CCDC171-201ENST00000380701 C19orf54Q5BKX5 351 aa6.2□□□□□ -1.42
CCDC171-201ENST00000380701 NSUN5P2Q63ZY6 315 aa6.2□□□□□ -1.42
CCDC171-201ENST00000380701 STPG2Q8N412 459 aa6.2□□□□□ -1.42
CCDC171-201ENST00000380701 FAM168AQ92567 244 aa6.2□□□□□ -1.42
CCDC171-201ENST00000380701 TMEM54Q969K7 222 aa6.2□□□□□ -1.42
CCDC171-201ENST00000380701 NPFFR1Q9GZQ6 430 aa6.2□□□□□ -1.42
CCDC171-201ENST00000380701 ZNF703Q9H7S9 590 aaPredicted RBP6.2□□□□□ -1.42
CCDC171-201ENST00000380701 TNFSF18Q9UNG2 199 aa6.2□□□□□ -1.42
CCDC171-201ENST00000380701 UFC1Q9Y3C8 167 aa6.2□□□□□ -1.42
CCDC171-201ENST00000380701 RGPD3A6NKT7 1758 aaPredicted RBP6.2□□□□□ -1.42
CCDC171-201ENST00000380701 LOC101059948A0A1B0GTJ6 334 aa6.2□□□□□ -1.42
CCDC171-201ENST00000380701 OR5AL1P0C617 328 aa6.2□□□□□ -1.42
CCDC171-201ENST00000380701 TUSC1Q2TAM9 212 aa6.2□□□□□ -1.42
CCDC171-201ENST00000380701 A8MWL6 223 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 PPP1R17O96001 155 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 SLC35E4Q6ICL7 350 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 C20orf204Q6ZNR8 217 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 GBGT1Q8N5D6 347 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 BVESQ8NE79 360 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 SCMH1Q96GD3 660 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 TIMP4Q99727 224 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 PAXXQ9BUH6 204 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 MICAL3Q7RTP6 2002 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 C11orf94C9JXX5 98 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 FCN1O00602 326 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 ICMTO60725 284 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 PITX3O75364 302 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 FCGR3AP08637 254 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 SCGB1C2P0DMR2 95 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 HSPE1P61604 102 aaKnown RBP6.19□□□□□ -1.42
CCDC171-201ENST00000380701 AESQ08117 197 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 MRPL32Q9BYC8 188 aaKnown RBP6.19□□□□□ -1.42
CCDC171-201ENST00000380701 PARP12Q9H0J9 701 aaKnown RBP6.19□□□□□ -1.42
CCDC171-201ENST00000380701 MFNGO00587 321 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 GYPAP02724 150 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 IGKV3-11P04433 115 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 DLX1P56177 255 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 ZNF345Q14585 488 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 CENPVQ7Z7K6 275 aaPredicted RBP6.19□□□□□ -1.42
CCDC171-201ENST00000380701 OSR1Q8TAX0 266 aaPredicted RBP6.19□□□□□ -1.42
CCDC171-201ENST00000380701 C16orf92Q96LL3 132 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 PEMTQ9UBM1 199 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 HSPB8Q9UJY1 196 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 WDR90Q96KV7 1748 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 RP1L1Q8IWN7 2480 aaPredicted RBP6.19□□□□□ -1.42
CCDC171-201ENST00000380701 TRBV5-5A0A0J9YX44 114 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 EPOPA6NHQ4 379 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 CEACAM18A8MTB9 384 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 SOCS1O15524 211 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 TMEM33P57088 247 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 IRF3Q14653 427 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 C8orf82Q6P1X6 216 aaPredicted RBP6.19□□□□□ -1.42
CCDC171-201ENST00000380701 KLF14Q8TD94 323 aaPredicted RBP6.19□□□□□ -1.42
CCDC171-201ENST00000380701 ORAI1Q96D31 301 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 RHOVQ96L33 236 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 LINC00052Q96N35 136 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 CHODLQ9H9P2 273 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 DPM3Q9P2X0 92 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 IL17BQ9UHF5 180 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 COL5A3P25940 1745 aaPredicted RBP6.19□□□□□ -1.42
CCDC171-201ENST00000380701 IGLV3-12A0A075B6K2 115 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 RBFOX3A6NFN3 312 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 H7C1H1 209 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 TCAPO15273 167 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 OR2H2O95918 312 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 SFTA3P0C7M3 94 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 POLR2GP62487 172 aaKnown RBP eCLIP6.19□□□□□ -1.42
CCDC171-201ENST00000380701 SPANXN1Q5VSR9 72 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 H1FOOQ8IZA3 346 aaPredicted RBP6.19□□□□□ -1.42
CCDC171-201ENST00000380701 TMEM52Q8NDY8 209 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 MYOZ3Q8TDC0 251 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 RAB24Q969Q5 203 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 GSX1Q9H4S2 264 aaPredicted RBP6.19□□□□□ -1.42
CCDC171-201ENST00000380701 TNFRSF19Q9NS68 423 aa6.19□□□□□ -1.42
CCDC171-201ENST00000380701 LOC102723996A0A087X1L8 192 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 IGLV1-36A0A0B4J1U3 117 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 HRKO00198 91 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 CD1BP29016 333 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 UCP3P55916 312 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 TIAL1Q01085 375 aaKnown RBP eCLIP6.18□□□□□ -1.42
CCDC171-201ENST00000380701 AMMECR1LQ6DCA0 310 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 ZAR1Q86SH2 424 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 DOK5Q9P104 306 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 TRGC1P0CF51 173 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 MYOD1P15172 320 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 LIMS1P48059 325 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 PPOXP50336 477 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 PDCD1Q15116 288 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 INPP5JQ15735 1006 aaPredicted RBP6.18□□□□□ -1.42
CCDC171-201ENST00000380701 GTF2H5Q6ZYL4 71 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 ABHD12Q8N2K0 398 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 VAMP8Q9BV40 100 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 QTRT1Q9BXR0 403 aaKnown RBP6.18□□□□□ -1.42
CCDC171-201ENST00000380701 KLF7O75840 302 aaPredicted RBP6.18□□□□□ -1.42
CCDC171-201ENST00000380701 NPPCP23582 126 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 DYNLT3P51808 116 aa6.18□□□□□ -1.42
CCDC171-201ENST00000380701 RNASEKQ6P5S7 137 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms