RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 A0A1B0GW55 424 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 DUXBA0A1W2PPF3 345 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 DUX4L2P0CJ85 424 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 DUX4L3P0CJ86 424 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 DUX4L4P0CJ87 422 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 DUX4L5P0CJ88 424 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 DUX4L6P0CJ89 424 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 DUX4L7P0CJ90 424 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 HKR1P10072 659 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 VDAC1P21796 283 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 CR1LQ2VPA4 569 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 DUX4L9Q6RFH8 374 aaPredicted RBP16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 CA5BP1Q8WTZ4 195 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 IL22RA2Q969J5 263 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 CITED4Q96RK1 184 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 DUX4Q9UBX2 424 aa16.53■□□□□ 0.24
PDLIM5-205ENST00000380180 PLAUP00749 431 aa16.52■□□□□ 0.24
PDLIM5-205ENST00000380180 SERPINE2P07093 398 aa16.52■□□□□ 0.24
PDLIM5-205ENST00000380180 MUC1P15941 1255 aaPredicted RBP16.52■□□□□ 0.24
PDLIM5-205ENST00000380180 P2RX3P56373 397 aa16.52■□□□□ 0.24
PDLIM5-205ENST00000380180 HTD2P86397 168 aa16.52■□□□□ 0.24
PDLIM5-205ENST00000380180 FAM209AQ5JX71 171 aa16.52■□□□□ 0.24
PDLIM5-205ENST00000380180 ZNF645Q8N7E2 425 aa16.52■□□□□ 0.24
PDLIM5-205ENST00000380180 OR2D2Q9H210 308 aa16.52■□□□□ 0.24
PDLIM5-205ENST00000380180 SAP30LQ9HAJ7 183 aa16.52■□□□□ 0.24
PDLIM5-205ENST00000380180 HIVEP3Q5T1R4 2406 aa16.52■□□□□ 0.23
PDLIM5-205ENST00000380180 TUBAL3A6NHL2 446 aa16.52■□□□□ 0.23
PDLIM5-205ENST00000380180 ADAM20O43506 726 aa16.52■□□□□ 0.23
PDLIM5-205ENST00000380180 GYPAP02724 150 aa16.52■□□□□ 0.23
PDLIM5-205ENST00000380180 APOBEC3AP31941 199 aaPredicted RBP16.52■□□□□ 0.23
PDLIM5-205ENST00000380180 NMSQ5H8A3 153 aa16.52■□□□□ 0.23
PDLIM5-205ENST00000380180 TEX36Q5VZQ5 186 aa16.52■□□□□ 0.23
PDLIM5-205ENST00000380180 CCL13Q99616 98 aa16.52■□□□□ 0.23
PDLIM5-205ENST00000380180 EGLN1Q9GZT9 426 aa16.52■□□□□ 0.23
PDLIM5-205ENST00000380180 CYTL1Q9NRR1 136 aa16.52■□□□□ 0.23
PDLIM5-205ENST00000380180 ZFP57Q9NU63 452 aa16.52■□□□□ 0.23
PDLIM5-205ENST00000380180 ANKHD1Q8IWZ3 2542 aaKnown RBP16.51■□□□□ 0.23
PDLIM5-205ENST00000380180 LRRC30A6NM36 301 aa16.51■□□□□ 0.23
PDLIM5-205ENST00000380180 DEFB108AA8MXU0 73 aa16.51■□□□□ 0.23
PDLIM5-205ENST00000380180 ST8SIA3O43173 380 aa16.51■□□□□ 0.23
PDLIM5-205ENST00000380180 ZNF16P17020 682 aaPredicted RBP16.51■□□□□ 0.23
PDLIM5-205ENST00000380180 RPL12P30050 165 aaKnown RBP16.51■□□□□ 0.23
PDLIM5-205ENST00000380180 LTC4SQ16873 150 aa16.51■□□□□ 0.23
PDLIM5-205ENST00000380180 GAFA1Q96PS6 74 aa16.51■□□□□ 0.23
PDLIM5-205ENST00000380180 SPIN2AQ99865 258 aa16.51■□□□□ 0.23
PDLIM5-205ENST00000380180 SPIN2BQ9BPZ2 258 aa16.51■□□□□ 0.23
PDLIM5-205ENST00000380180 ZNF665Q9H7R5 613 aa16.51■□□□□ 0.23
PDLIM5-205ENST00000380180 KCNJ16Q9NPI9 418 aa16.51■□□□□ 0.23
PDLIM5-205ENST00000380180 LEUTXA8MZ59 168 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 E5RGE8 158 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 MST1LQ2TV78 715 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 ZNF788Q6ZQV5 615 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 LRRC46Q96FV0 321 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 PLEKHF2Q9H8W4 249 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 ZC4H2Q9NQZ6 224 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 NSG2Q9Y328 171 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 ABCA4P78363 2273 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 MED19A0JLT2 244 aaPredicted RBP16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 CLEC18AA5D8T8 446 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 SIAH2O43255 324 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 NMBP08949 121 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 CLEC18CQ8NCF0 446 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 ZBTB34Q8NCN2 500 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 C14orf79Q96F83 325 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 C5orf30Q96GV9 206 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 DYNLRB1Q9NP97 96 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 OR6C3Q9NZP0 311 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 POMT1Q9Y6A1 747 aa16.5■□□□□ 0.23
PDLIM5-205ENST00000380180 PKD1L2Q7Z442 2459 aa16.49■□□□□ 0.23
PDLIM5-205ENST00000380180 ANKRD34BA5PLL1 514 aa16.49■□□□□ 0.23
PDLIM5-205ENST00000380180 IGKV1-39P01597 117 aa16.49■□□□□ 0.23
PDLIM5-205ENST00000380180 IGKV1D-39P04432 117 aa16.49■□□□□ 0.23
PDLIM5-205ENST00000380180 ZNF585BQ52M93 769 aa16.49■□□□□ 0.23
PDLIM5-205ENST00000380180 FAM216BQ8N7L0 139 aa16.49■□□□□ 0.23
PDLIM5-205ENST00000380180 MS4A5Q9H3V2 200 aa16.49■□□□□ 0.23
PDLIM5-205ENST00000380180 NCOR1P1Q9H4R4 102 aa16.49■□□□□ 0.23
PDLIM5-205ENST00000380180 LIN7CQ9NUP9 197 aaKnown RBP16.49■□□□□ 0.23
PDLIM5-205ENST00000380180 CISD1Q9NZ45 108 aaKnown RBP16.49■□□□□ 0.23
PDLIM5-205ENST00000380180 RNF115Q9Y4L5 304 aa16.49■□□□□ 0.23
PDLIM5-205ENST00000380180 AUP1Q9Y679 476 aa16.49■□□□□ 0.23
PDLIM5-205ENST00000380180 NKX2-1P43699 371 aaPredicted RBP16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 THOC7Q6I9Y2 204 aaKnown RBP16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 ZNF808Q8N4W9 903 aaPredicted RBP16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 DMBX1Q8NFW5 382 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 STOML3Q8TAV4 291 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 PHYHIPLQ96FC7 376 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 AGMATQ9BSE5 352 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 PLEKHA2Q9HB19 425 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 RCL1Q9Y2P8 373 aaKnown RBP16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 A0A0G2JRQ6 117 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 RNF212BA8MTL3 300 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 CGB3P0DN86 165 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 CGB7P0DN87 165 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 EIF4EBP1Q13541 118 aaPredicted RBP16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 EFNB3Q15768 340 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 MORN2Q502X0 79 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 CXorf66Q5JRM2 361 aaPredicted RBP16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 FAM74A1Q5RGS3 127 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 CCL17Q92583 94 aa16.48■□□□□ 0.23
PDLIM5-205ENST00000380180 ABHD14BQ96IU4 210 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms