RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 TGIF2-C20orf24A0A0A6YYL0 155 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 OR5B21A6NL26 309 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 NKX2-8O15522 239 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 ID3Q02535 119 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 ADIRFQ15847 76 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 ABHD14BQ96IU4 210 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 ZPBPQ9BS86 351 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 DCTN5Q9BTE1 182 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 RNF122Q9H9V4 155 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 SLC39A9Q9NUM3 307 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 COA4Q9NYJ1 87 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 PLCE1Q9P212 2302 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 J3QT63 122 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 DFFBO76075 338 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 SCAF4O95104 1147 aaKnown RBP10.96□□□□□ -0.65
USP11-204ENST00000377107 HEXAP06865 529 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 OR5D13Q8NGL4 314 aa10.96□□□□□ -0.65
USP11-204ENST00000377107 UNKLQ9H9P5 680 aaKnown RBP10.96□□□□□ -0.65
USP11-204ENST00000377107 IGKV3D-15A0A087WSY6 115 aa10.96□□□□□ -0.66
USP11-204ENST00000377107 TRBV23-1A0A0A0MS06 115 aa10.96□□□□□ -0.66
USP11-204ENST00000377107 LINC01387J3KSC0 135 aa10.96□□□□□ -0.66
USP11-204ENST00000377107 BAXQ07812 192 aa10.96□□□□□ -0.66
USP11-204ENST00000377107 LHX4Q969G2 390 aa10.96□□□□□ -0.66
USP11-204ENST00000377107 TMPRSS5Q9H3S3 457 aa10.96□□□□□ -0.66
USP11-204ENST00000377107 AURKAIP1Q9NWT8 199 aaPredicted RBP10.96□□□□□ -0.66
USP11-204ENST00000377107 SPRR3Q9UBC9 169 aa10.96□□□□□ -0.66
USP11-204ENST00000377107 TRAV20A0A0B4J274 112 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 RAMP3O60896 148 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 HOXA6P31267 233 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 ARL16Q0P5N6 197 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 ZNF324BQ6AW86 544 aaPredicted RBP10.95□□□□□ -0.66
USP11-204ENST00000377107 ZNF880Q6PDB4 577 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 SPSB3Q6PJ21 355 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 LINC00470Q9BZP3 86 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 ARV1Q9H2C2 271 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 RIMS4Q9H426 269 aaPredicted RBP10.95□□□□□ -0.66
USP11-204ENST00000377107 TMEM265A0A087WTH1 108 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 OR5H1A6NKK0 313 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 IFNA4P05014 189 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 TAS2R30P59541 319 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 FGFRL1Q8N441 504 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 DRAM1Q8N682 238 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 WDYHV1Q96HA8 205 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 OR4C12Q96R67 309 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 HINT2Q9BX68 163 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 TREM2Q9NZC2 230 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 MPV17P39210 176 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 CD200P41217 278 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 PAX9P55771 341 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 IL24Q13007 206 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 FIP1L1Q6UN15 594 aaKnown RBP10.95□□□□□ -0.66
USP11-204ENST00000377107 TVP23CQ96ET8 276 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 IFT22Q9H7X7 185 aa10.95□□□□□ -0.66
USP11-204ENST00000377107 SRP19P09132 144 aaKnown RBP10.94□□□□□ -0.66
USP11-204ENST00000377107 S100A2P29034 98 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 HBG1P69891 147 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 HBG2P69892 147 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 GPR87Q9BY21 358 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 OR51I2Q9H344 312 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 KIAA1456Q9P272 454 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 PSG11Q9UQ72 335 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 POLDIP2Q9Y2S7 368 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 CFAP47Q6ZTR5 3102 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 PSPNO60542 156 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 HAND1O96004 215 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 HBE1P02100 147 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 TDGF1P13385 188 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 PSG7Q13046 419 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 ICAM4Q14773 271 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 WDR86Q86TI4 376 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 H1FOOQ8IZA3 346 aaPredicted RBP10.94□□□□□ -0.66
USP11-204ENST00000377107 GALMQ96C23 342 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 MGAQ8IWI9 3026 aa10.94□□□□□ -0.66
USP11-204ENST00000377107 INTS1Q8N201 2190 aaKnown RBP10.94□□□□□ -0.66
USP11-204ENST00000377107 LRP5LA4QPB2 252 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 ST8SIA5O15466 376 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 IGKV1-39P01597 117 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 IGKV1-5P01602 117 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 IGKV1D-39P04432 117 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FABP1P07148 127 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 SSTR5P35346 364 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 EDDM3BP56851 147 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 SLC38A11Q08AI6 406 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 KRTAP27-1Q3LI81 207 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 Q3ZCU0 254 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 RAB40CQ96S21 281 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 LIN7CQ9NUP9 197 aaKnown RBP10.93□□□□□ -0.66
USP11-204ENST00000377107 GNG12Q9UBI6 72 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FAM90A10PA6NDY2 464 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FAM90A18PA6NE21 464 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FAM90A16PA6NEW6 464 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FAM90A20PA6NIJ5 464 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FAM90A8PA6NJQ4 464 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FAM90A7PA6NKC0 464 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FAM90A22PA8MWA6 464 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FAM90A12PA8MX19 464 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FAM90A5PA8MXJ8 464 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FAM90A23PA8MXZ1 464 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 TRGC2P03986 189 aa10.93□□□□□ -0.66
USP11-204ENST00000377107 FAM90A15PP0C7V4 464 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms