RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 GP9P14770 177 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 FSTP19883 344 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 DCKP27707 260 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 OR3A3P47888 321 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 GABPB1Q06547 395 aaPredicted RBP10.65□□□□□ -0.7
CXCL12-202ENST00000374426 DMKNQ6E0U4 476 aaPredicted RBP10.65□□□□□ -0.7
CXCL12-202ENST00000374426 SIGIRRQ6IA17 410 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 LIN54Q6MZP7 749 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 ZFP1Q6P2D0 407 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 TMPRSS11AQ6ZMR5 421 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 ZNF833PQ6ZTB9 187 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 JAGN1Q8N5M9 183 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 NPBQ8NG41 125 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 CASTOR1Q8WTX7 329 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 RDH12Q96NR8 316 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 TOLLIPQ9H0E2 274 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 TPSG1Q9NRR2 321 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 CKLFQ9UBR5 152 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 JPT1Q9UK76 154 aa10.65□□□□□ -0.7
CXCL12-202ENST00000374426 UBE2QL1A1L167 161 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 FAM90A7PA6NKC0 464 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 FAM90A23PA8MXZ1 464 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 LINC01619G3V211 115 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 GLAP06280 429 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 MGMTP16455 207 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 FUT3P21217 361 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 CRIP2P52943 208 aaPredicted RBP10.64□□□□□ -0.71
CXCL12-202ENST00000374426 ECSCRQ19T08 205 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 Q499Y3 187 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 AWAT2Q6E213 333 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 ACSM6Q6P461 480 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 ZNF554Q86TJ5 538 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 LYPD6Q86Y78 171 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 MRPL30Q8TCC3 161 aaKnown RBP10.64□□□□□ -0.71
CXCL12-202ENST00000374426 ARPC1AQ92747 370 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 PGLYRP3Q96LB9 341 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 Q96M66 194 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 C9orf16Q9BUW7 83 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 SELENOIQ9C0D9 397 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 CLEC2DQ9UHP7 191 aa10.64□□□□□ -0.71
CXCL12-202ENST00000374426 IGHV4OR15-8A0A075B7B6 117 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 A0A087WW49 117 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 SAA2-SAA4A0A096LPE2 208 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 TRBV5-7A0A0A0MS05 114 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 LCE6AA0A183 80 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 A0A1W2PN81 502 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 A0A1W2PPK0 400 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 YPEL1O60688 119 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 MAS1P04201 325 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 LGALS1P09382 135 aaKnown RBP10.63□□□□□ -0.71
CXCL12-202ENST00000374426 SAA2P0DJI9 122 aaPredicted RBP10.63□□□□□ -0.71
CXCL12-202ENST00000374426 CHRNA7P36544 502 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 HTD2P86397 168 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 YIF1BQ5BJH7 314 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 C6orf141Q5SZD1 244 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 ZFP41Q8N8Y5 198 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 YPEL2Q96QA6 119 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 OR14A2Q96R54 314 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 CITED4Q96RK1 184 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 ZMAT4Q9H898 229 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 KCNIP1Q9NZI2 227 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 KIAA1456Q9P272 454 aa10.63□□□□□ -0.71
CXCL12-202ENST00000374426 DIMT1Q9UNQ2 313 aaKnown RBP10.63□□□□□ -0.71
CXCL12-202ENST00000374426 FOXA2Q9Y261 457 aaPredicted RBP10.63□□□□□ -0.71
CXCL12-202ENST00000374426 HYDINQ4G0P3 5121 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 PDCD6O75340 191 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 CRTAPO75718 401 aaPredicted RBP10.62□□□□□ -0.71
CXCL12-202ENST00000374426 OR8U9P0C7N5 309 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 EGR2P11161 476 aaPredicted RBP10.62□□□□□ -0.71
CXCL12-202ENST00000374426 CX3CL1P78423 397 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 LY6G6FQ5SQ64 297 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 ZNF660Q6AZW8 331 aaPredicted RBP10.62□□□□□ -0.71
CXCL12-202ENST00000374426 CDH26Q8IXH8 852 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 ZNF485Q8NCK3 441 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 OR6Q1Q8NGQ2 317 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 TM2D3Q9BRN9 247 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 CST11Q9H112 138 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 IFI27L2Q9H2X8 130 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 GHITMQ9H3K2 345 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 FBXL15Q9H469 300 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 PALMDQ9NP74 551 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 ERGIC3Q9Y282 383 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 NUBP2Q9Y5Y2 271 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 A3GALT2U3KPV4 340 aa10.62□□□□□ -0.71
CXCL12-202ENST00000374426 FCN1O00602 326 aa10.61□□□□□ -0.71
CXCL12-202ENST00000374426 RGS11O94810 467 aa10.61□□□□□ -0.71
CXCL12-202ENST00000374426 BAG2O95816 211 aa10.61□□□□□ -0.71
CXCL12-202ENST00000374426 MYL12AP19105 171 aa10.61□□□□□ -0.71
CXCL12-202ENST00000374426 SRSF7Q16629 238 aaKnown RBP eCLIP10.61□□□□□ -0.71
CXCL12-202ENST00000374426 LRRC36Q1X8D7 754 aa10.61□□□□□ -0.71
CXCL12-202ENST00000374426 ZFAND6Q6FIF0 208 aa10.61□□□□□ -0.71
CXCL12-202ENST00000374426 FAM131AQ6UXB0 335 aa10.61□□□□□ -0.71
CXCL12-202ENST00000374426 TCTEX1D1Q8N7M0 179 aa10.61□□□□□ -0.71
CXCL12-202ENST00000374426 OR2AK2Q8NG84 335 aa10.61□□□□□ -0.71
CXCL12-202ENST00000374426 FAM46BQ96A09 425 aa10.61□□□□□ -0.71
CXCL12-202ENST00000374426 GALMQ96C23 342 aa10.61□□□□□ -0.71
CXCL12-202ENST00000374426 EXOSC1Q9Y3B2 195 aaKnown RBP10.61□□□□□ -0.71
CXCL12-202ENST00000374426 TNCP24821 2201 aa10.61□□□□□ -0.71
CXCL12-202ENST00000374426 RRHO14718 337 aa10.6□□□□□ -0.71
CXCL12-202ENST00000374426 ST8SIA5O15466 376 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms