RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 OSR2Q8N2R0 312 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 SLC25A40Q8TBP6 338 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 MARS2Q96GW9 593 aaKnown RBP8.73□□□□□ -1.01
COL5A1-202ENST00000371820 REEP6Q96HR9 211 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 LYZL4Q96KX0 146 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 DIRC2Q96SL1 478 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 EGLN1Q9GZT9 426 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 SLC25A31Q9H0C2 315 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 NAA60Q9H7X0 242 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 TUBA4BQ9H853 241 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 FN3KRPQ9HA64 309 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 SMCO4Q9NRQ5 59 aa8.73□□□□□ -1.01
COL5A1-202ENST00000371820 ANK2Q01484 3957 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 ZNF816-ZNF321PA0A0X1KG74 233 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 A0A1B0GW64 132 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 BTBD17A6NE02 478 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 UMAD1C9J7I0 102 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 H0YIZ8 118 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 ST8SIA3O43173 380 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 NDUFA2O43678 99 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 LILRA1O75019 489 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 FBXO24O75426 580 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 CDS2O95674 445 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 TGFAP01135 160 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 LCATP04180 440 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 IFNA4P05014 189 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 HOXB5P09067 269 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 SLC2A1P11166 492 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 FUT3P21217 361 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 FCGR2CP31995 323 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 WNT5AP41221 380 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 RAB2AP61019 212 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 HERV-K104P61576 105 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 ANKRD55Q3KP44 614 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 ALKBH6Q3KRA9 238 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 KRTAP27-1Q3LI81 207 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 KRTAP24-1Q3LI83 254 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 BTNL8Q6UX41 500 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 LIAT1Q6ZQX7 453 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 LINC00596Q86U02 117 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 LINC01356Q8N9X3 169 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 Q8NFD4 153 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 OR8G5Q8NG78 346 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 OR5L1Q8NGL2 311 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 LYPD6BQ8NI32 183 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 KLF14Q8TD94 323 aaPredicted RBP8.72□□□□□ -1.01
COL5A1-202ENST00000371820 TMED6Q8WW62 240 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 GTF3AQ92664 365 aaKnown RBP8.72□□□□□ -1.01
COL5A1-202ENST00000371820 MSI2Q96DH6 328 aaKnown RBP8.72□□□□□ -1.01
COL5A1-202ENST00000371820 TIMD4Q96H15 378 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 OR10C1Q96KK4 312 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 OR2J1Q9GZK6 312 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 ARV1Q9H2C2 271 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 SAP30LQ9HAJ7 183 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 SPACA1Q9HBV2 294 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 ZDHHC8Q9ULC8 765 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 MALRD1Q5VYJ5 2156 aa8.72□□□□□ -1.01
COL5A1-202ENST00000371820 IGHV1-69-2A0A0G2JMI3 117 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 PQLC2LA1A4F0 135 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 SDCBPO00560 298 aaPredicted RBP8.71□□□□□ -1.02
COL5A1-202ENST00000371820 PPIHO43447 177 aaKnown RBP8.71□□□□□ -1.02
COL5A1-202ENST00000371820 TIMM8AO60220 97 aaPredicted RBP8.71□□□□□ -1.02
COL5A1-202ENST00000371820 PDCD6O75340 191 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 ADAP1O75689 374 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 TSPAN15O95858 294 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 PLATP00750 562 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 KNG1P01042 644 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 CD5P06127 495 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 ADH4P08319 380 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 FOLR2P14207 255 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 FAHP16930 419 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 TNFSF4P23510 183 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 CHATP28329 748 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 S100A10P60903 97 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 RND3P61587 244 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 CCL8P80075 99 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 S100A12P80511 92 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 ZNF266Q14584 549 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 HFEQ30201 348 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 SPATA46Q5T0L3 261 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 GGNBP1Q5YKI7 109 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 MKXQ8IYA7 352 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 C15orf54Q8N8G6 183 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 RTN4IP1Q8WWV3 396 aaPredicted RBP8.71□□□□□ -1.02
COL5A1-202ENST00000371820 SPACA5Q96QH8 159 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 OR2S2Q9NQN1 319 aa8.71□□□□□ -1.02
COL5A1-202ENST00000371820 RCC2Q9P258 522 aaKnown RBP8.71□□□□□ -1.02
COL5A1-202ENST00000371820 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.71□□□□□ -1.02
COL5A1-202ENST00000371820 KIR2DS1A0A191URI9 304 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 B4DSR2 109 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 LYNX1G3V0Z9 82 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 MED6O75586 246 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 MBPP02686 304 aaPredicted RBP8.7□□□□□ -1.02
COL5A1-202ENST00000371820 LYNX1P0DP58 116 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 SRD5A1P18405 259 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 GABRR1P24046 479 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 COL8A2P25067 703 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 MPV17P39210 176 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 KIR2DS4P43632 304 aa8.7□□□□□ -1.02
COL5A1-202ENST00000371820 KCNJ3P48549 501 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms