RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 UNC119Q13432 240 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 SMIM8Q96KF7 97 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 GAL3ST2Q9H3Q3 398 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 HSPB8Q9UJY1 196 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 LOC101059948A0A1B0GTJ6 334 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 A6NDN8 102 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 TFF2Q03403 129 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 BPIFA4PQ86YQ2 179 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 OR2M7Q8NG81 312 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 TMEM183AQ8IXX5 376 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 ADIPOR1Q96A54 375 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 Q96M66 194 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 OR4C12Q96R67 309 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 IL19Q9UHD0 177 aa13.79□□□□□ -0.2
COL17A1-202ENST00000369733 hADV38S2A0JD32 116 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 HIST1H1EP10412 219 aaKnown RBP13.78□□□□□ -0.2
COL17A1-202ENST00000369733 EPHA8P29322 1005 aaPredicted RBP13.78□□□□□ -0.2
COL17A1-202ENST00000369733 AESQ08117 197 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 WFIKKN1Q96NZ8 548 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 RBKSQ9H477 322 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 PXMP4Q9Y6I8 212 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 SIPA1L1O43166 1804 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 GZMHP20718 246 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 MT-ND6P03923 174 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 COL8A1P27658 744 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 CEACAM21Q3KPI0 293 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 ZNF506Q5JVG8 444 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 OR2Y1Q8NGV0 311 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 HEXA-AS1Q9H8Q6 139 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 SEBOXQ9HB31 216 aaPredicted RBP13.78□□□□□ -0.2
COL17A1-202ENST00000369733 RNF24Q9Y225 148 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 IFITM10A6NMD0 228 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 DNPH1O43598 174 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 SRSF3P84103 164 aaKnown RBP13.78□□□□□ -0.2
COL17A1-202ENST00000369733 WNK3Q9BYP7 1800 aa13.78□□□□□ -0.2
COL17A1-202ENST00000369733 MRPL18Q9H0U6 180 aaKnown RBP13.78□□□□□ -0.2
COL17A1-202ENST00000369733 AGAP20933 346 aa13.77□□□□□ -0.2
COL17A1-202ENST00000369733 C10orf113Q5VZT2 155 aa13.77□□□□□ -0.2
COL17A1-202ENST00000369733 PRNDQ9UKY0 176 aa13.77□□□□□ -0.2
COL17A1-202ENST00000369733 IGHMP01871 453 aa13.77□□□□□ -0.2
COL17A1-202ENST00000369733 HOXB1P14653 301 aaPredicted RBP13.77□□□□□ -0.2
COL17A1-202ENST00000369733 ZNF784Q8NCA9 323 aaPredicted RBP13.77□□□□□ -0.2
COL17A1-202ENST00000369733 TAS2R60P59551 318 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 SNAI3Q3KNW1 292 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 OR8I2Q8N0Y5 310 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 CIDEAO60543 219 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 PRSS1P07477 247 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 MFAP2P55001 183 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 RIGQ13278 110 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 C3AR1Q16581 482 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 C1orf53Q5VUE5 145 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 OR4X1Q8NH49 305 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 GMPPAQ96IJ6 420 aaPredicted RBP13.77□□□□□ -0.21
COL17A1-202ENST00000369733 TP53RKQ96S44 253 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 UQCR10Q9UDW1 63 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 A0A0J9YW62 118 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 A0A1B0GTI1 187 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 ZNF207O43670 478 aaKnown RBP13.77□□□□□ -0.21
COL17A1-202ENST00000369733 S100A4P26447 101 aaKnown RBP13.77□□□□□ -0.21
COL17A1-202ENST00000369733 OR4A47Q6IF82 309 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 IL36RNQ9UBH0 155 aa13.77□□□□□ -0.21
COL17A1-202ENST00000369733 SYNGR1O43759 233 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 HIST1H1BP16401 226 aaKnown RBP13.76□□□□□ -0.21
COL17A1-202ENST00000369733 KLF3P57682 345 aaPredicted RBP13.76□□□□□ -0.21
COL17A1-202ENST00000369733 TNFAIP6P98066 277 aaPredicted RBP13.76□□□□□ -0.21
COL17A1-202ENST00000369733 OR2V2Q96R30 315 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 PARP14Q460N5 1801 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 K7ERU9 68 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 DEFB109BQ30KR1 87 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 LY6G6FQ5SQ64 297 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 BIVMQ86UB2 503 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 VSTM2AQ8TAG5 236 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 TXNDC17Q9BRA2 123 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 DICER1Q9UPY3 1922 aaKnown RBP13.76□□□□□ -0.21
COL17A1-202ENST00000369733 ZNF729A6NN14 1252 aaPredicted RBP13.76□□□□□ -0.21
COL17A1-202ENST00000369733 TMEM229AB2RXF0 380 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 CTSBP07858 339 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 ZNF137PP52743 207 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 ZNF600Q6ZNG1 722 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 FLYWCH2Q96CP2 140 aaKnown RBP13.76□□□□□ -0.21
COL17A1-202ENST00000369733 NPVFQ9HCQ7 196 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 IGHV4-34P06331 123 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 MELTFP08582 738 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 SLC22A18ASQ8N1D0 253 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 PARLQ9H300 379 aa13.76□□□□□ -0.21
COL17A1-202ENST00000369733 K7ESF4 209 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 TRAV38-1A0A0B4J264 116 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 FAM90A10PA6NDY2 464 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 FAM90A18PA6NE21 464 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 FAM90A16PA6NEW6 464 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 FAM90A20PA6NIJ5 464 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 FAM90A8PA6NJQ4 464 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 FAM90A7PA6NKC0 464 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 FAM90A22PA8MWA6 464 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 FAM90A12PA8MX19 464 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 FAM90A5PA8MXJ8 464 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 FAM90A23PA8MXZ1 464 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 FAM90A15PP0C7V4 464 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 FAM90A13PP0C7W8 464 aa13.75□□□□□ -0.21
COL17A1-202ENST00000369733 FAM90A14PP0C7W9 464 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms