RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CATR1Q13166 79 aa11.78□□□□□ -0.52
USF1-202ENST00000368020 BTN1A1Q13410 526 aa11.78□□□□□ -0.52
USF1-202ENST00000368020 PRR30Q53SZ7 412 aaPredicted RBP11.78□□□□□ -0.52
USF1-202ENST00000368020 GFRALQ6UXV0 394 aa11.78□□□□□ -0.52
USF1-202ENST00000368020 Q6ZRG5 221 aa11.78□□□□□ -0.52
USF1-202ENST00000368020 TMEM252Q8N6L7 170 aa11.78□□□□□ -0.52
USF1-202ENST00000368020 NKX6-2Q9C056 277 aaPredicted RBP11.78□□□□□ -0.52
USF1-202ENST00000368020 TREM1Q9NP99 234 aa11.78□□□□□ -0.52
USF1-202ENST00000368020 UQCC1Q9NVA1 299 aa11.78□□□□□ -0.52
USF1-202ENST00000368020 COA4Q9NYJ1 87 aa11.78□□□□□ -0.52
USF1-202ENST00000368020 LAMP3Q9UQV4 416 aa11.78□□□□□ -0.52
USF1-202ENST00000368020 WSB1Q9Y6I7 421 aa11.78□□□□□ -0.52
USF1-202ENST00000368020 DFFBO76075 338 aa11.77□□□□□ -0.52
USF1-202ENST00000368020 SNAPINO95295 136 aa11.77□□□□□ -0.52
USF1-202ENST00000368020 TSPAN15O95858 294 aa11.77□□□□□ -0.52
USF1-202ENST00000368020 ADH4P08319 380 aa11.77□□□□□ -0.52
USF1-202ENST00000368020 AKR1C2P52895 323 aa11.77□□□□□ -0.52
USF1-202ENST00000368020 DVL1P1P54792 670 aaPredicted RBP11.77□□□□□ -0.52
USF1-202ENST00000368020 TAS2R30P59541 319 aa11.77□□□□□ -0.52
USF1-202ENST00000368020 NHLH2Q02577 135 aa11.77□□□□□ -0.52
USF1-202ENST00000368020 S100PBPQ96BU1 408 aa11.77□□□□□ -0.52
USF1-202ENST00000368020 MSL2Q9HCI7 577 aa11.77□□□□□ -0.52
USF1-202ENST00000368020 SRRM5B3KS81 715 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 F8W036 122 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 M0R1B8 84 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 PRRG2O14669 202 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 ABCD4O14678 606 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 SPINT2O43291 252 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 IGLV2-14P01704 120 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 OR8U9P0C7N5 309 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 GABRA2P47869 451 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 OR3A1P47881 315 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 CAMLGP49069 296 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 CXorf66Q5JRM2 361 aaPredicted RBP11.77□□□□□ -0.53
USF1-202ENST00000368020 KRBOX4Q5JUW0 171 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 PRAMEF6Q5VXH4 476 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 ZNF474Q6S9Z5 364 aaPredicted RBP11.77□□□□□ -0.53
USF1-202ENST00000368020 ZNF826PQ6ZT77 177 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 C5orf24Q7Z6I8 188 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 DRAM1Q8N682 238 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.77□□□□□ -0.53
USF1-202ENST00000368020 ST6GALNAC3Q8NDV1 305 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 OR2Z1Q8NG97 314 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 OR8U1Q8NH10 309 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 LRRC29Q8WV35 223 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 PPP1R3CQ9UQK1 317 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 RNF115Q9Y4L5 304 aa11.77□□□□□ -0.53
USF1-202ENST00000368020 IGSF23A1L1A6 192 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 FAM24AA6NFZ4 105 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 C12orf77C9JDV5 145 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 HBZP02008 142 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 PRH1P02810 166 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 ZNF83P51522 516 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 NKX6-1P78426 367 aaPredicted RBP11.76□□□□□ -0.53
USF1-202ENST00000368020 HTD2P86397 168 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 COL10A1Q03692 680 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 BOLLQ8N9W6 283 aaKnown RBP11.76□□□□□ -0.53
USF1-202ENST00000368020 EDARADDQ8WWZ3 215 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 GPR146Q96CH1 333 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 PBDC1Q9BVG4 233 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 NCOR1P1Q9H4R4 102 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 WFDC1Q9HC57 220 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 UFSP2Q9NUQ7 469 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 BSNQ9UPA5 3926 aa11.76□□□□□ -0.53
USF1-202ENST00000368020 IGLV3-9A0A075B6K5 115 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 BTBD17A6NE02 478 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 RNASEK-C17orf49H0YIS7 233 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 WNT9BO14905 357 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 CHST1O43916 411 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 CD5P06127 495 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 GZMHP20718 246 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 ZNF273Q14593 569 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 MIDNQ504T8 468 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 DPPA3Q6W0C5 159 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 ZNF66Q6ZN08 573 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 MRGPRGQ86SM5 289 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 COQ2Q96H96 371 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 ATP5SQ99766 215 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 SMDT1Q9H4I9 107 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 CACFD1Q9UGQ2 172 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 FZR1Q9UM11 496 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 PCNX1Q96RV3 2341 aa11.75□□□□□ -0.53
USF1-202ENST00000368020 EPHA1P21709 976 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 PRDX2P32119 198 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 GATA4P43694 442 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 SULT1A1P50225 295 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 AESQ08117 197 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 PEA15Q15121 130 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 DOLPP1Q86YN1 238 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 OR5C1Q8NGR4 320 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 SNX22Q96L94 193 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 HSD17B10Q99714 261 aaKnown RBP11.74□□□□□ -0.53
USF1-202ENST00000368020 OR2D2Q9H210 308 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 C19orf12Q9NSK7 152 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 ELOVL5Q9NYP7 299 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 DUSP13Q9UII6 198 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 MMP24Q9Y5R2 645 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 KIAA2026Q5HYC2 2103 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 TRAV39A0A0B4J263 110 aa11.74□□□□□ -0.53
USF1-202ENST00000368020 IGHV3-64DA0A0J9YX35 117 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms