RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 A0A1W2PPC1 479 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 NTSR1P30989 418 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 PRDX4Q13162 271 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF718Q3SXZ3 478 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 HEPN1Q6WQI6 88 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 BEND2Q8NDZ0 799 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 SEBOXQ9HB31 216 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-203ENST00000358544 ARID2Q68CP9 1835 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 HOXC4P09017 264 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-203ENST00000358544 NRN1Q9NPD7 142 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 GDE1Q9NZC3 331 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 A0A1B0GW64 132 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 A0A1B0GWJ7 208 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 F8VVB4 439 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 F8VWA3 439 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 SLC17A3O00476 420 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 S1PR2O95136 353 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 MPZP25189 248 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 CAPZBP47756 277 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 ORAOV1Q8WV07 137 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 RPS11P62280 158 aaKnown RBP eCLIP5.32□□□□□ -1.56
VPS13B-203ENST00000358544 OR8I2Q8N0Y5 310 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 OR2V1Q8NHB1 315 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 NDFIP1Q9BT67 221 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 NRXN3Q9Y4C0 1643 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 SIPA1L3O60292 1781 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-203ENST00000358544 IGHV3-20A0A0C4DH32 117 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 PLPP3O14495 311 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 ATG4DQ86TL0 474 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-203ENST00000358544 D2HGDHQ8N465 521 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 SPPL3Q8TCT6 385 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 CD99L2Q8TCZ2 262 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM106BQ9NUM4 274 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 HCSTQ9UBK5 93 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 INSL6Q9Y581 213 aa5.32□□□□□ -1.56
VPS13B-203ENST00000358544 TIMM8AO60220 97 aaPredicted RBP5.31□□□□□ -1.56
VPS13B-203ENST00000358544 ERHP84090 104 aaKnown RBP5.31□□□□□ -1.56
VPS13B-203ENST00000358544 PDCD1Q15116 288 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 C1orf185Q5T7R7 199 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 C12orf76Q8N812 135 aaPredicted RBP5.31□□□□□ -1.56
VPS13B-203ENST00000358544 MISP3Q96FF7 219 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 KLF2Q9Y5W3 355 aaPredicted RBP5.31□□□□□ -1.56
VPS13B-203ENST00000358544 USP54Q70EL1 1684 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM238LA0A1B0GVL6 79 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 A6NJY4 79 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 LINC01387J3KSC0 135 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 SERF1AO75920 110 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 ICAM5Q9UMF0 924 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 MGAM2Q2M2H8 2515 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 MPZL1O95297 269 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 BGLAPP02818 100 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 ZIC1Q15915 447 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 TCTN1Q2MV58 587 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 C1orf194Q5T5A4 169 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 LYSMD4Q5XG99 296 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM140Q9NV12 185 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 TCF20Q9UGU0 1960 aaKnown RBP5.31□□□□□ -1.56
VPS13B-203ENST00000358544 A1L4Q6 167 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 MRPL58Q14197 206 aaKnown RBP5.31□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM187Q14656 261 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM164Q5U3C3 297 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 CPEB3Q8NE35 698 aaKnown RBP5.31□□□□□ -1.56
VPS13B-203ENST00000358544 SIGMAR1Q99720 223 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 OCIAD1Q9NX40 245 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 OR2W1Q9Y3N9 320 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 EPPINO95925 133 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 IGHEP01854 428 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 OR4A8P0C604 315 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 ERASQ7Z444 233 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 ASB10Q8WXI3 467 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 WNT10AQ9GZT5 417 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 OR4C46A6NHA9 309 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 SMIM13P0DJ93 91 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 FOXK1P85037 733 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 OR5AS1Q8N127 324 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 OR8B2Q96RD0 313 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 HSD17B10Q99714 261 aaKnown RBP5.31□□□□□ -1.56
VPS13B-203ENST00000358544 WFDC1Q9HC57 220 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 H0Y980 276 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 DEFA4P12838 97 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 UNQ9370/PRO34162Q6UXP9 181 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 CALHM1Q8IU99 346 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 POLDIP2Q9Y2S7 368 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 CER1O95813 267 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 ADRA2AP08913 450 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 HMGA1P17096 107 aaKnown RBP5.31□□□□□ -1.56
VPS13B-203ENST00000358544 RRADP55042 308 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 RHBDD1Q8TEB9 315 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 HBZP02008 142 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 ARR3P36575 388 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 OR1L4Q8NGR5 311 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 FAM216AQ8WUB2 273 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 MENTQ9BUN1 341 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 PARP14Q460N5 1801 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 LCTP09848 1927 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 FAM157CP0CG43 387 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 ZNF77Q15935 545 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 DIRC2Q96SL1 478 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 GABRG3Q99928 467 aa5.31□□□□□ -1.56
VPS13B-203ENST00000358544 FOXQ1Q9C009 403 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms