RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 UTS2O95399 124 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 RNFT1Q5M7Z0 435 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 TBC1D26Q86UD7 250 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 PLPPR1Q8TBJ4 325 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 FNDC4Q9H6D8 234 aaPredicted RBP4.42□□□□□ -1.7
SKP1-202ENST00000353411 BARX1Q9HBU1 254 aaPredicted RBP4.42□□□□□ -1.7
SKP1-202ENST00000353411 HES4Q9HCC6 221 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 ANKRD10Q9NXR5 420 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 ZNF391Q9UJN7 358 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 TSC2P49815 1807 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 OTOGLQ3ZCN5 2332 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 ZNF732B4DXR9 585 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 H3BUT2 72 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 MPDU1O75352 247 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 MOGAT3Q86VF5 341 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 OR2M7Q8NG81 312 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 DNASE2BQ8WZ79 361 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 FGF13Q92913 245 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 HELZP42694 1942 aaKnown RBP4.42□□□□□ -1.7
SKP1-202ENST00000353411 SHISA3A0PJX4 238 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 M0R296 226 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 PSMB5P28074 263 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 EDDM3BP56851 147 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 FAM219BQ5XKK7 198 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 CADM4Q8NFZ8 388 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 OR4D11Q8NGI4 311 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 LIPHQ8WWY8 451 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 RNF126Q9BV68 326 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 TIMM9Q9Y5J7 89 aa4.42□□□□□ -1.7
SKP1-202ENST00000353411 IGSF23A1L1A6 192 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 NDUFB4O95168 129 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 ICAM4Q14773 271 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 ADIPOQQ15848 244 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 OR52E5Q8NH55 327 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 CLDN23Q96B33 292 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 NKX2-6A6NCS4 301 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 ZNF324O75467 553 aaPredicted RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 PPBPP02775 128 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 DUSP3P51452 185 aaPredicted RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 MFAP2P55001 183 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 TMEM50BP56557 158 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 JAG1P78504 1218 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 SRSF9Q13242 221 aaKnown RBP eCLIP4.41□□□□□ -1.7
SKP1-202ENST00000353411 PRTGQ2VWP7 1150 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 ZNF260Q3ZCT1 412 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 SCGB1D4Q6XE38 83 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 NR2C2APQ86WQ0 139 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 AGBL5Q8NDL9 886 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 MS4A6AQ9H2W1 248 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 TECRQ9NZ01 308 aaKnown RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 KCNE3Q9Y6H6 103 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 COL18A1P39060 1754 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 HSPB6O14558 160 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 SPINT2O43291 252 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 PRSS1P07477 247 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 FAM157CP0CG43 387 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 CEBPBP17676 345 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 CBLN1P23435 193 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 CD70P32970 193 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 FUT6P51993 359 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 RRADP55042 308 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 UNQ5815/PRO19632Q6UWF5 114 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 TMEM45BQ96B21 275 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 MRGPRX1Q96LB2 322 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 RLFQ13129 1914 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 A0A0J9YY10 115 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 CD5LO43866 347 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 IL4P05112 153 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 CD46P15529 392 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 APOBEC1P41238 236 aaKnown RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 ZNF121P58317 390 aaPredicted RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 PLPP4Q5VZY2 271 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 TMEM215Q68D42 235 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 DMRTC2Q8IXT2 367 aaPredicted RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 C10orf126Q8N4M7 172 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 OR8A1Q8NGG7 326 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 SSBP4Q9BWG4 385 aaPredicted RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 STRCP1A6NGW2 1772 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 ANAPC1Q9H1A4 1944 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 RBBP6Q7Z6E9 1792 aaKnown RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 K7EP13 123 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 APOMO95445 188 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 CD22P20273 847 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 SOX8P57073 446 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 ZNF750Q32MQ0 723 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 ACSF3Q4G176 576 aaPredicted RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 LRRC10Q5BKY1 277 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 TEX38Q6PEX7 206 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 FBXL14Q8N1E6 418 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 APOBEC3DQ96AK3 386 aaPredicted RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 INSM2Q96T92 566 aaPredicted RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 MRPL16Q9NX20 251 aaKnown RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 IL36BQ9NZH7 164 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 ZNF236Q9UL36 1845 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 TRBV5-7A0A0A0MS05 114 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 MSGN1A6NI15 193 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 UCP3P55916 312 aa4.41□□□□□ -1.7
SKP1-202ENST00000353411 IBA57Q5T440 356 aaKnown RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 SPACA9Q96E40 222 aaPredicted RBP4.41□□□□□ -1.7
SKP1-202ENST00000353411 MVB12AQ96EY5 273 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms