RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SUCNR1Q9BXA5 334 aa22.14■■□□□ 1.13
SSBP4-202ENST00000348495 TMEM133Q9H2Q1 129 aa22.14■■□□□ 1.13
SSBP4-202ENST00000348495 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.13■■□□□ 1.133e-7■■■□□ 18.9
SSBP4-202ENST00000348495 TRAV20A0A0B4J274 112 aa22.13■■□□□ 1.13
SSBP4-202ENST00000348495 FAM172BPA6NC97 362 aa22.13■■□□□ 1.13
SSBP4-202ENST00000348495 ITGB1BP1O14713 200 aa22.13■■□□□ 1.13
SSBP4-202ENST00000348495 TCRBP04435 133 aa22.13■■□□□ 1.13
SSBP4-202ENST00000348495 IGHV4-31P0DP07 118 aa22.13■■□□□ 1.13
SSBP4-202ENST00000348495 PRTN3P24158 256 aa22.13■■□□□ 1.13
SSBP4-202ENST00000348495 CD34P28906 385 aa22.13■■□□□ 1.13
SSBP4-202ENST00000348495 HERV-K104P61576 105 aa22.13■■□□□ 1.13
SSBP4-202ENST00000348495 CIARTQ8N365 385 aaPredicted RBP22.13■■□□□ 1.13
SSBP4-202ENST00000348495 MSI2Q96DH6 328 aaKnown RBP22.13■■□□□ 1.13
SSBP4-202ENST00000348495 WNK2Q9Y3S1 2297 aa22.12■■□□□ 1.13
SSBP4-202ENST00000348495 IGHV3-7P01780 117 aa22.12■■□□□ 1.13
SSBP4-202ENST00000348495 UCP3P55916 312 aa22.12■■□□□ 1.13
SSBP4-202ENST00000348495 DLX1P56177 255 aa22.12■■□□□ 1.13
SSBP4-202ENST00000348495 FXYD4P59646 89 aa22.12■■□□□ 1.13
SSBP4-202ENST00000348495 FAM216AQ8WUB2 273 aa22.12■■□□□ 1.13
SSBP4-202ENST00000348495 EDARADDQ8WWZ3 215 aa22.12■■□□□ 1.13
SSBP4-202ENST00000348495 TNFRSF14Q92956 283 aa22.12■■□□□ 1.13
SSBP4-202ENST00000348495 PSG11Q9UQ72 335 aa22.12■■□□□ 1.13
SSBP4-202ENST00000348495 SURF2Q15527 256 aaPredicted RBP22.11■■□□□ 1.13
SSBP4-202ENST00000348495 CT45A1Q5HYN5 189 aa22.11■■□□□ 1.13
SSBP4-202ENST00000348495 METTL11BQ5VVY1 283 aa22.11■■□□□ 1.13
SSBP4-202ENST00000348495 C8orf31Q8N9H6 132 aa22.11■■□□□ 1.13
SSBP4-202ENST00000348495 CT45A3Q8NHU0 189 aa22.11■■□□□ 1.13
SSBP4-202ENST00000348495 MARCH1Q8TCQ1 289 aa22.11■■□□□ 1.13
SSBP4-202ENST00000348495 TMEM186Q96B77 213 aa22.11■■□□□ 1.13
SSBP4-202ENST00000348495 ITGB1BP2Q9UKP3 347 aa22.11■■□□□ 1.13
SSBP4-202ENST00000348495 MYO9AB2RTY4 2548 aa22.11■■□□□ 1.13
SSBP4-202ENST00000348495 SLC31A2O15432 143 aa22.11■■□□□ 1.13
SSBP4-202ENST00000348495 ECI1P42126 302 aa22.11■■□□□ 1.13
SSBP4-202ENST00000348495 LUMP51884 338 aaPredicted RBP22.11■■□□□ 1.13
SSBP4-202ENST00000348495 CCBE1Q6UXH8 406 aaPredicted RBP22.11■■□□□ 1.13
SSBP4-202ENST00000348495 OR2AK2Q8NG84 335 aa22.11■■□□□ 1.13
SSBP4-202ENST00000348495 VSIG4Q9Y279 399 aa22.11■■□□□ 1.13
SSBP4-202ENST00000348495 OR8U9P0C7N5 309 aa22.1■■□□□ 1.13
SSBP4-202ENST00000348495 GZMKP49863 264 aa22.1■■□□□ 1.13
SSBP4-202ENST00000348495 VMO1Q7Z5L0 202 aa22.1■■□□□ 1.13
SSBP4-202ENST00000348495 OR8U1Q8NH10 309 aa22.1■■□□□ 1.13
SSBP4-202ENST00000348495 ZNF596Q8TC21 504 aa22.1■■□□□ 1.13
SSBP4-202ENST00000348495 TBX15Q96SF7 602 aa22.1■■□□□ 1.13
SSBP4-202ENST00000348495 MMP28Q9H239 520 aa22.1■■□□□ 1.13
SSBP4-202ENST00000348495 SIRT7Q9NRC8 400 aa22.1■■□□□ 1.13
SSBP4-202ENST00000348495 HIF1ANQ9NWT6 349 aa22.1■■□□□ 1.13
SSBP4-202ENST00000348495 GPR132Q9UNW8 380 aa22.1■■□□□ 1.13
SSBP4-202ENST00000348495 NUBP2Q9Y5Y2 271 aa22.1■■□□□ 1.13
SSBP4-202ENST00000348495 TRIM16LQ309B1 348 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 HCP5Q6MZN7 132 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 SLC25A48Q6ZT89 311 aaKnown RBP22.09■■□□□ 1.13
SSBP4-202ENST00000348495 ABHD12Q8N2K0 398 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 ZDHHC22Q8N966 263 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 TOMM40LQ969M1 308 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 UPRTQ96BW1 309 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 ABHD14AQ9BUJ0 271 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 C20orf85Q9H1P6 137 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 IFI27L2Q9H2X8 130 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 NUDT15Q9NV35 164 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 FLVCR2Q9UPI3 526 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 IGHV2-26A0A0B4J1V2 119 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 ST8SIA5O15466 376 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 TOX4O94842 621 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 GATA3P23771 443 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 PRB3Q04118 309 aaPredicted RBP22.09■■□□□ 1.13
SSBP4-202ENST00000348495 BAMBIQ13145 260 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 DCAF12L2Q5VW00 463 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 PLET1Q6UQ28 207 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 CENPSQ8N2Z9 138 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 LINC00311Q8N616 119 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 MINDY2Q8NBR6 621 aa22.09■■□□□ 1.13
SSBP4-202ENST00000348495 A0A1W2PPE3 182 aa22.08■■□□□ 1.12
SSBP4-202ENST00000348495 IGLV2-14P01704 120 aa22.08■■□□□ 1.12
SSBP4-202ENST00000348495 GNG10P50151 68 aa22.08■■□□□ 1.12
SSBP4-202ENST00000348495 OR9G1Q8NH87 305 aa22.08■■□□□ 1.12
SSBP4-202ENST00000348495 SECTM1Q8WVN6 248 aa22.08■■□□□ 1.12
SSBP4-202ENST00000348495 MARVELD1Q9BSK0 173 aa22.08■■□□□ 1.12
SSBP4-202ENST00000348495 RSRP1Q9BUV0 290 aa22.08■■□□□ 1.12
SSBP4-202ENST00000348495 SLC5A7Q9GZV3 580 aa22.08■■□□□ 1.12
SSBP4-202ENST00000348495 C5orf66Q9H5L9 145 aa22.08■■□□□ 1.12
SSBP4-202ENST00000348495 J3QR06 171 aa22.07■■□□□ 1.12
SSBP4-202ENST00000348495 GNRHRP30968 328 aa22.07■■□□□ 1.12
SSBP4-202ENST00000348495 RAB7AP51149 207 aa22.07■■□□□ 1.12
SSBP4-202ENST00000348495 SLC38A6Q8IZM9 456 aa22.07■■□□□ 1.12
SSBP4-202ENST00000348495 OR11H6Q8NGC7 330 aa22.07■■□□□ 1.12
SSBP4-202ENST00000348495 CREB3L1Q96BA8 519 aa22.07■■□□□ 1.12
SSBP4-202ENST00000348495 SCGB3A2Q96PL1 93 aa22.07■■□□□ 1.12
SSBP4-202ENST00000348495 CLEC7AQ9BXN2 247 aa22.07■■□□□ 1.12
SSBP4-202ENST00000348495 FLNAP21333 2647 aaKnown RBP22.06■■□□□ 1.12
SSBP4-202ENST00000348495 ZANQ9Y493 2812 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 PGAM2P15259 253 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 LPCAT3Q6P1A2 487 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 OR13D1Q8NGV5 346 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 RTBDNQ9BSG5 229 aaPredicted RBP22.06■■□□□ 1.12
SSBP4-202ENST00000348495 PCGF1Q9BSM1 259 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 HEXA-AS1Q9H8Q6 139 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 CCL28Q9NRJ3 127 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 ZNRD1Q9P1U0 126 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 RNF150Q9ULK6 438 aa22.06■■□□□ 1.12
SSBP4-202ENST00000348495 RBM7Q9Y580 266 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms