RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 A0A1W2PP55 124 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 SLC25A1P53007 311 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 RPL18Q07020 188 aaKnown RBP5.45□□□□□ -1.54
VCAN-203ENST00000343200 UBE2V1Q13404 147 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 KLF9Q13886 244 aaPredicted RBP5.45□□□□□ -1.54
VCAN-203ENST00000343200 OR52N5Q8NH56 324 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 OTOSQ8NHW6 89 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 KCNE4Q8WWG9 221 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 C1orf43Q9BWL3 253 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 TPSD1Q9BZJ3 242 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 NPIPB6E9PJ23 425 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 OR4A8P0C604 315 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 LINC00869P0C866 280 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 FCGR2BP31994 310 aaPredicted RBP5.45□□□□□ -1.54
VCAN-203ENST00000343200 RGRP47804 291 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 CEACAM16Q2WEN9 425 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 FAM219AQ8IW50 185 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 TP53I13Q8NBR0 393 aaPredicted RBP5.45□□□□□ -1.54
VCAN-203ENST00000343200 ST8SIA1Q92185 356 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 GALNT14Q96FL9 552 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 IGSF21Q96ID5 467 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 Q96M85 177 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 CACNG4Q9UBN1 327 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 TRAV21A0A0B4J279 112 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 GRIFINA4D1Z8 144 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 ARL14EPLP0DKL9 152 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 DRD1P21728 446 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 MAS1LP35410 378 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 CTU1Q7Z7A3 348 aaKnown RBP5.45□□□□□ -1.54
VCAN-203ENST00000343200 PRNTQ86SH4 94 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 AMER3Q8N944 861 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 CADM4Q8NFZ8 388 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 FGF14Q92915 247 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 OXGR1Q96P68 337 aa5.45□□□□□ -1.54
VCAN-203ENST00000343200 ATP5LO75964 103 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 PLNP26678 52 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 SSBP2P81877 361 aaPredicted RBP5.44□□□□□ -1.54
VCAN-203ENST00000343200 PAX2Q02962 417 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 VAX1Q5SQQ9 334 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 ZNF774Q6NX45 483 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 NUDT8Q8WV74 236 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 IMMP2LQ96T52 175 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 HDHD3Q9BSH5 251 aaPredicted RBP5.44□□□□□ -1.54
VCAN-203ENST00000343200 ASB1Q9Y576 335 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 CFDP00746 253 aaPredicted RBP5.44□□□□□ -1.54
VCAN-203ENST00000343200 DANCRP0C864 163 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 CACNG7P62955 275 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 RBPJQ06330 500 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 TMEM179BQ7Z7N9 219 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 VSTM2AQ8TAG5 236 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 FER1L6-AS2Q96M78 137 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 LAT2Q9GZY6 243 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 LRP12Q9Y561 859 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 KISS1Q15726 138 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 ACSM5Q6NUN0 579 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 SSMEM1Q8WWF3 244 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 AURKAIP1Q9NWT8 199 aaPredicted RBP5.44□□□□□ -1.54
VCAN-203ENST00000343200 SLCO1C1Q9NYB5 712 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 CARHSP1Q9Y2V2 147 aaKnown RBP5.44□□□□□ -1.54
VCAN-203ENST00000343200 IGHV1-69-2A0A0G2JMI3 117 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 DNASE2O00115 360 aaPredicted RBP5.44□□□□□ -1.54
VCAN-203ENST00000343200 CDIPTO14735 213 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 TNFRSF6BO95407 300 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 IGFBP4P22692 258 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 C2orf83Q53S99 150 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 SLC48A1Q6P1K1 146 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 PIANPQ8IYJ0 282 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 ST6GALNAC3Q8NDV1 305 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 OR1K1Q8NGR3 316 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 TSACCQ96A04 125 aaPredicted RBP5.44□□□□□ -1.54
VCAN-203ENST00000343200 APOBEC3DQ96AK3 386 aaPredicted RBP5.44□□□□□ -1.54
VCAN-203ENST00000343200 NPTNQ9Y639 398 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 TRAV2A0A0B4J234 112 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 ADM5C9JUS6 153 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 PAGE4O60829 102 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 OCIAD2Q56VL3 154 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 CA10Q9NS85 328 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 AMMECR1Q9Y4X0 333 aaPredicted RBP5.44□□□□□ -1.54
VCAN-203ENST00000343200 ODAMA1E959 279 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 H3BRM9 83 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 B3GALT4O96024 378 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 CBLN1P23435 193 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 GAGE1Q13065 139 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 GGTLC2Q14390 218 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 ZNF260Q3ZCT1 412 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 HIST1H2BAQ96A08 127 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 IGHV4-39P01824 125 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 PRDX2P32119 198 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 TMEM258P61165 79 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 RPS4XP62701 263 aaKnown RBP5.44□□□□□ -1.54
VCAN-203ENST00000343200 LY6G5CQ5SRR4 150 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 DUSP23Q9BVJ7 150 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 TMEM160Q9NX00 188 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 BDP1A6H8Y1 2624 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 HEPACAM2A8MVW5 462 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 ZNF585BQ52M93 769 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 CAMKMTQ7Z624 323 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 OR5AN1Q8NGI8 311 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 C10orf35Q96D05 121 aa5.44□□□□□ -1.54
VCAN-203ENST00000343200 PRDM13Q9H4Q3 707 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms