RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 RBM14Q96PK6 669 aaKnown RBP15.39■□□□□ 0.05
SYNE4-202ENST00000340477 Q9N2K0 584 aa15.39■□□□□ 0.05
SYNE4-202ENST00000340477 RAB27BO00194 218 aa15.38■□□□□ 0.05
SYNE4-202ENST00000340477 MFNGO00587 321 aa15.38■□□□□ 0.05
SYNE4-202ENST00000340477 SLC31A2O15432 143 aa15.38■□□□□ 0.05
SYNE4-202ENST00000340477 ZBTB25P24278 435 aa15.38■□□□□ 0.05
SYNE4-202ENST00000340477 PROK1P58294 105 aa15.38■□□□□ 0.05
SYNE4-202ENST00000340477 LSM3P62310 102 aaKnown RBP15.38■□□□□ 0.05
SYNE4-202ENST00000340477 CT45A1Q5HYN5 189 aa15.38■□□□□ 0.05
SYNE4-202ENST00000340477 FAM53AQ6NSI3 398 aaPredicted RBP15.38■□□□□ 0.05
SYNE4-202ENST00000340477 CT45A3Q8NHU0 189 aa15.38■□□□□ 0.05
SYNE4-202ENST00000340477 RTN4IP1Q8WWV3 396 aaPredicted RBP15.38■□□□□ 0.05
SYNE4-202ENST00000340477 EDARADDQ8WWZ3 215 aa15.38■□□□□ 0.05
SYNE4-202ENST00000340477 MRPS26Q9BYN8 205 aaKnown RBP15.38■□□□□ 0.05
SYNE4-202ENST00000340477 RHBDL2Q9NX52 303 aa15.38■□□□□ 0.05
SYNE4-202ENST00000340477 SLC23A1Q9UHI7 598 aa15.38■□□□□ 0.05
SYNE4-202ENST00000340477 MOB4Q9Y3A3 225 aa15.38■□□□□ 0.05
SYNE4-202ENST00000340477 TRDCB7Z8K6 153 aa15.37■□□□□ 0.05
SYNE4-202ENST00000340477 ZNF137PP52743 207 aa15.37■□□□□ 0.05
SYNE4-202ENST00000340477 DIAPH2-AS1Q14236 149 aa15.37■□□□□ 0.05
SYNE4-202ENST00000340477 ZNF702PQ9H963 129 aa15.37■□□□□ 0.05
SYNE4-202ENST00000340477 IGKV1D-33P01593 117 aa15.36■□□□□ 0.05
SYNE4-202ENST00000340477 IGKV1-33P01594 117 aa15.36■□□□□ 0.05
SYNE4-202ENST00000340477 FCGR3AP08637 254 aa15.36■□□□□ 0.05
SYNE4-202ENST00000340477 VDAC2P45880 294 aaPredicted RBP15.36■□□□□ 0.05
SYNE4-202ENST00000340477 SERPINB10P48595 397 aa15.36■□□□□ 0.05
SYNE4-202ENST00000340477 ZNF134P52741 427 aa15.36■□□□□ 0.05
SYNE4-202ENST00000340477 IZUMO1Q8IYV9 350 aa15.36■□□□□ 0.05
SYNE4-202ENST00000340477 OR4A4PQ8NGN8 299 aa15.36■□□□□ 0.05
SYNE4-202ENST00000340477 OR13F1Q8NGS4 319 aa15.36■□□□□ 0.05
SYNE4-202ENST00000340477 CFHR4Q92496 578 aa15.36■□□□□ 0.05
SYNE4-202ENST00000340477 FUNDC2Q9BWH2 189 aa15.36■□□□□ 0.05
SYNE4-202ENST00000340477 SIGLEC9Q9Y336 463 aa15.36■□□□□ 0.05
SYNE4-202ENST00000340477 FAM90A9PA6NNJ1 464 aa15.35■□□□□ 0.05
SYNE4-202ENST00000340477 FABP7O15540 132 aa15.35■□□□□ 0.05
SYNE4-202ENST00000340477 LANCL1O43813 399 aa15.35■□□□□ 0.05
SYNE4-202ENST00000340477 GSTP1P09211 210 aaKnown RBP15.35■□□□□ 0.05
SYNE4-202ENST00000340477 CDNFQ49AH0 187 aa15.35■□□□□ 0.05
SYNE4-202ENST00000340477 Q6ZPA2 131 aa15.35■□□□□ 0.05
SYNE4-202ENST00000340477 Q8N2B8 174 aa15.35■□□□□ 0.05
SYNE4-202ENST00000340477 KLHDC1Q8N7A1 406 aa15.35■□□□□ 0.05
SYNE4-202ENST00000340477 OR2T10Q8NGZ9 312 aa15.35■□□□□ 0.05
SYNE4-202ENST00000340477 ST6GALNAC6Q969X2 333 aa15.35■□□□□ 0.05
SYNE4-202ENST00000340477 S1PR3Q99500 378 aa15.35■□□□□ 0.05
SYNE4-202ENST00000340477 PIPOXQ9P0Z9 390 aa15.35■□□□□ 0.05
SYNE4-202ENST00000340477 KCNK7Q9Y2U2 307 aa15.35■□□□□ 0.05
SYNE4-202ENST00000340477 A0A0A6YYH2 397 aa15.34■□□□□ 0.05
SYNE4-202ENST00000340477 A6NJ64 397 aa15.34■□□□□ 0.05
SYNE4-202ENST00000340477 SCTP09683 121 aa15.34■□□□□ 0.05
SYNE4-202ENST00000340477 SMIM18P0DKX4 95 aa15.34■□□□□ 0.05
SYNE4-202ENST00000340477 VSIG10L2P0DP72 767 aa15.34■□□□□ 0.05
SYNE4-202ENST00000340477 CD1BP29016 333 aa15.34■□□□□ 0.05
SYNE4-202ENST00000340477 CEACAM6P40199 344 aa15.34■□□□□ 0.05
SYNE4-202ENST00000340477 GNG2P59768 71 aa15.34■□□□□ 0.05
SYNE4-202ENST00000340477 PITPNAQ00169 270 aa15.34■□□□□ 0.05
SYNE4-202ENST00000340477 HABP2Q14520 560 aaPredicted RBP15.34■□□□□ 0.05
SYNE4-202ENST00000340477 C5orf24Q7Z6I8 188 aa15.34■□□□□ 0.05
SYNE4-202ENST00000340477 CITED1Q99966 193 aa15.34■□□□□ 0.05
SYNE4-202ENST00000340477 GHITMQ9H3K2 345 aa15.34■□□□□ 0.05
SYNE4-202ENST00000340477 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.34■□□□□ 0.05
SYNE4-202ENST00000340477 DIABLOQ9NR28 239 aa15.34■□□□□ 0.05
SYNE4-202ENST00000340477 IGHV3-72A0A0B4J1Y9 119 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 M0QZ24 198 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 ITGB1BP1O14713 200 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 RAB29O14966 203 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 ST8SIA5O15466 376 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 DTYMKP23919 212 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 BLCAPP62952 87 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 HNF4GQ14541 408 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 HERPUD1Q15011 391 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 ABCA11PQ4W5N1 156 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 C9orf152Q5JTZ5 239 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 HACD4Q5VWC8 232 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 FAM71F2Q6NXP2 309 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 OR1A1Q9P1Q5 309 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 SPATA2Q9UM82 520 aa15.33■□□□□ 0.04
SYNE4-202ENST00000340477 SAA2-SAA4A0A096LPE2 208 aa15.32■□□□□ 0.04
SYNE4-202ENST00000340477 FGF16O43320 207 aa15.32■□□□□ 0.04
SYNE4-202ENST00000340477 DIRAS3O95661 229 aa15.32■□□□□ 0.04
SYNE4-202ENST00000340477 MOSP00540 346 aa15.32■□□□□ 0.04
SYNE4-202ENST00000340477 SAA2P0DJI9 122 aaPredicted RBP15.32■□□□□ 0.04
SYNE4-202ENST00000340477 TGFBR1P36897 503 aa15.32■□□□□ 0.04
SYNE4-202ENST00000340477 RPS19P39019 145 aaKnown RBP15.32■□□□□ 0.04
SYNE4-202ENST00000340477 SRSF7Q16629 238 aaKnown RBP eCLIP15.32■□□□□ 0.04
SYNE4-202ENST00000340477 PNLIPRP3Q17RR3 467 aa15.32■□□□□ 0.04
SYNE4-202ENST00000340477 GPR141Q7Z602 305 aa15.32■□□□□ 0.04
SYNE4-202ENST00000340477 OR5H6Q8NGV6 325 aa15.32■□□□□ 0.04
SYNE4-202ENST00000340477 OR10J5Q8NHC4 309 aa15.32■□□□□ 0.04
SYNE4-202ENST00000340477 EAF1Q96JC9 268 aaPredicted RBP15.32■□□□□ 0.04
SYNE4-202ENST00000340477 GINS4Q9BRT9 223 aa15.32■□□□□ 0.04
SYNE4-202ENST00000340477 IFI27L2Q9H2X8 130 aa15.32■□□□□ 0.04
SYNE4-202ENST00000340477 TMEM235A6NFC5 223 aa15.31■□□□□ 0.04
SYNE4-202ENST00000340477 NCBP2LA6PVI3 153 aaKnown RBP15.31■□□□□ 0.04
SYNE4-202ENST00000340477 BET1O15155 118 aa15.31■□□□□ 0.04
SYNE4-202ENST00000340477 NCS1P62166 190 aa15.31■□□□□ 0.04
SYNE4-202ENST00000340477 SRSF4Q08170 494 aaKnown RBP15.31■□□□□ 0.04
SYNE4-202ENST00000340477 LSAMPQ13449 338 aa15.31■□□□□ 0.04
SYNE4-202ENST00000340477 UBE2NLQ5JXB2 153 aa15.31■□□□□ 0.04
SYNE4-202ENST00000340477 ZNF833PQ6ZTB9 187 aa15.31■□□□□ 0.04
SYNE4-202ENST00000340477 OR8H1Q8NGG4 311 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms