RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 FOXE3Q13461 319 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 TRAM1Q15629 374 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 NKAPLQ5M9Q1 402 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 OR10K2Q6IF99 312 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 ZNF880Q6PDB4 577 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 ZNF695Q8IW36 515 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 OR6M1Q8NGM8 313 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 FAAP24Q9BTP7 215 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 RIMS4Q9H426 269 aaPredicted RBP13.95□□□□□ -0.18
HDDC3-201ENST00000330334 ABRACLQ9P1F3 81 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 PPP1CCP36873 323 aaKnown RBP13.94□□□□□ -0.18
HDDC3-201ENST00000330334 RANBP1P43487 201 aa13.94□□□□□ -0.18
HDDC3-201ENST00000330334 CDX1P47902 265 aaPredicted RBP13.94□□□□□ -0.18
HDDC3-201ENST00000330334 CFHR3Q02985 330 aa13.94□□□□□ -0.18
HDDC3-201ENST00000330334 GNMTQ14749 295 aa13.94□□□□□ -0.18
HDDC3-201ENST00000330334 LIPKQ5VXJ0 399 aa13.94□□□□□ -0.18
HDDC3-201ENST00000330334 TMEM91Q6ZNR0 172 aa13.94□□□□□ -0.18
HDDC3-201ENST00000330334 ZNF833PQ6ZTB9 187 aa13.94□□□□□ -0.18
HDDC3-201ENST00000330334 C8orf86Q6ZUL3 223 aa13.94□□□□□ -0.18
HDDC3-201ENST00000330334 C6orf201Q7Z4U5 140 aa13.94□□□□□ -0.18
HDDC3-201ENST00000330334 FAM89BQ8N5H3 189 aa13.94□□□□□ -0.18
HDDC3-201ENST00000330334 CYYR1Q96J86 154 aa13.94□□□□□ -0.18
HDDC3-201ENST00000330334 ANKRD60Q9BZ19 345 aa13.94□□□□□ -0.18
HDDC3-201ENST00000330334 TRBV6-6A0A0A6YYG2 114 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 NUDT19A8MXV4 375 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 RGS10O43665 173 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 ARL6IP5O75915 188 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 IGHG4P01861 327 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 BLVRBP30043 206 aaPredicted RBP13.93□□□□□ -0.18
HDDC3-201ENST00000330334 MLLT11Q13015 90 aaPredicted RBP13.93□□□□□ -0.18
HDDC3-201ENST00000330334 CXorf66Q5JRM2 361 aaPredicted RBP13.93□□□□□ -0.18
HDDC3-201ENST00000330334 FAM71F2Q6NXP2 309 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 C18orf65Q6ZTR6 163 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 PRSS48Q7RTY5 328 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 SVOPQ8N4V2 548 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 KLHL30-AS1Q8NEE0 82 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 OR2AK2Q8NG84 335 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 NABP2Q9BQ15 211 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 GHITMQ9H3K2 345 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 PLEKHJ1Q9NW61 149 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 STEAP1Q9UHE8 339 aa13.93□□□□□ -0.18
HDDC3-201ENST00000330334 SLC17A2O00624 439 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 ITGB1BP1O14713 200 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 OR5H8P0DN80 308 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 CPEP16870 476 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 CRHBPP24387 322 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 KRTAP10-11P60412 298 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 KIR2DS1Q14954 304 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 MOB1BQ7L9L4 216 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 TMEM203Q969S6 136 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 HSPB9Q9BQS6 159 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 NICN1Q9BSH3 213 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 URM1Q9BTM9 101 aaKnown RBP13.92□□□□□ -0.18
HDDC3-201ENST00000330334 LPAR5Q9H1C0 372 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 ZMAT5Q9UDW3 170 aaKnown RBP13.92□□□□□ -0.18
HDDC3-201ENST00000330334 HSF4Q9ULV5 492 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 MGAT4AQ9UM21 535 aa13.92□□□□□ -0.18
HDDC3-201ENST00000330334 A0A0A6YYD4 124 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 K7EIL1 84 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 CCL24O00175 119 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 RPLP1P05386 114 aaKnown RBP13.91□□□□□ -0.18
HDDC3-201ENST00000330334 ARSBP15848 533 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 VDAC1P21796 283 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 ACTBP60709 375 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 MMDQ15546 238 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 C5orf24Q7Z6I8 188 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 NPBQ8NG41 125 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 DPF1Q92782 380 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 GFI1Q99684 422 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 MRPL20Q9BYC9 149 aaKnown RBP13.91□□□□□ -0.18
HDDC3-201ENST00000330334 IFI27L2Q9H2X8 130 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 VCX3BQ9H321 246 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 PIPOXQ9P0Z9 390 aa13.91□□□□□ -0.18
HDDC3-201ENST00000330334 ZNF107Q9UII5 783 aaPredicted RBP13.91□□□□□ -0.18
HDDC3-201ENST00000330334 RAB29O14966 203 aa13.9□□□□□ -0.18
HDDC3-201ENST00000330334 HLA-DRB1P01911 266 aa13.9□□□□□ -0.18
HDDC3-201ENST00000330334 HSMCR30P0CW71 290 aa13.9□□□□□ -0.18
HDDC3-201ENST00000330334 PSMB8P28062 276 aa13.9□□□□□ -0.18
HDDC3-201ENST00000330334 PSMD7P51665 324 aa13.9□□□□□ -0.18
HDDC3-201ENST00000330334 OR8U1Q8NH10 309 aa13.9□□□□□ -0.18
HDDC3-201ENST00000330334 RAX2Q96IS3 184 aa13.9□□□□□ -0.18
HDDC3-201ENST00000330334 MGLLQ99685 303 aa13.9□□□□□ -0.18
HDDC3-201ENST00000330334 ZNF251Q9BRH9 671 aa13.9□□□□□ -0.18
HDDC3-201ENST00000330334 PLGRKTQ9HBL7 147 aa13.9□□□□□ -0.18
HDDC3-201ENST00000330334 ACOT13Q9NPJ3 140 aa13.9□□□□□ -0.18
HDDC3-201ENST00000330334 SLC23A1Q9UHI7 598 aa13.9□□□□□ -0.18
HDDC3-201ENST00000330334 SAA2-SAA4A0A096LPE2 208 aa13.89□□□□□ -0.19
HDDC3-201ENST00000330334 FOXI3A8MTJ6 420 aaPredicted RBP13.89□□□□□ -0.19
HDDC3-201ENST00000330334 SOCS1O15524 211 aa13.89□□□□□ -0.19
HDDC3-201ENST00000330334 SAA2P0DJI9 122 aaPredicted RBP13.89□□□□□ -0.19
HDDC3-201ENST00000330334 OR3A3P47888 321 aa13.89□□□□□ -0.19
HDDC3-201ENST00000330334 HSPA13P48723 471 aa13.89□□□□□ -0.19
HDDC3-201ENST00000330334 RPS25P62851 125 aaKnown RBP13.89□□□□□ -0.19
HDDC3-201ENST00000330334 MYOZ3Q8TDC0 251 aa13.89□□□□□ -0.19
HDDC3-201ENST00000330334 IL1F10Q8WWZ1 152 aa13.89□□□□□ -0.19
HDDC3-201ENST00000330334 RITA1Q96K30 269 aa13.89□□□□□ -0.19
HDDC3-201ENST00000330334 KCTD7Q96MP8 289 aa13.89□□□□□ -0.19
HDDC3-201ENST00000330334 AGMATQ9BSE5 352 aa13.89□□□□□ -0.19
HDDC3-201ENST00000330334 KCNK15Q9H427 330 aa13.89□□□□□ -0.19
HDDC3-201ENST00000330334 CHMP1AQ9HD42 196 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 1023.2 ms