RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 TRAPPC6BQ86SZ2 158 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 CCDC190Q86UF4 302 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 OR52L2PQ8NGH6 319 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 OR4P4Q8NGL7 312 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 OR6Q1Q8NGQ2 317 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 ZNF596Q8TC21 504 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 GPX8Q8TED1 209 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 AP3S1Q92572 193 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 ARL11Q969Q4 196 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 RBMXL1Q96E39 390 aaKnown RBP4.78□□□□□ -1.64
SSX3-201ENST00000298396 ABHD1Q96SE0 405 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 CMSS1Q9BQ75 279 aaKnown RBP4.78□□□□□ -1.64
SSX3-201ENST00000298396 CABLES2Q9BTV7 478 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 C6orf62Q9GZU0 229 aaPredicted RBP4.78□□□□□ -1.64
SSX3-201ENST00000298396 TMEM133Q9H2Q1 129 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 METTL8Q9H825 291 aaKnown RBP4.78□□□□□ -1.64
SSX3-201ENST00000298396 TAF9BQ9HBM6 251 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 C12orf4Q9NQ89 552 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 OR1A1Q9P1Q5 309 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 EXTL2Q9UBQ6 330 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 TRAPPC2LQ9UL33 140 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 A3GALT2U3KPV4 340 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 V9GYH0 126 aa4.78□□□□□ -1.64
SSX3-201ENST00000298396 TENM1Q9UKZ4 2725 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 A0A0U1RQK1 487 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 FAM25AB3EWG3 89 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 FAM25CB3EWG5 89 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 FAM25GB3EWG6 89 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 LY6LH3BQJ8 138 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 H3BUI4 141 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 NPFFO15130 113 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 RGS5O15539 181 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 LANCL1O43813 399 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 CRLF1O75462 422 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 SCGNO76038 276 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 IGLV1-47P01700 117 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 FCER2P06734 321 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 GZMHP20718 246 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 NFYBP25208 207 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 SAA4P35542 130 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 PPP1CCP36873 323 aaKnown RBP4.77□□□□□ -1.65
SSX3-201ENST00000298396 UBE2E1P51965 193 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 GNG2P59768 71 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 ARFRP1Q13795 201 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 DIAPH2-AS1Q14236 149 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 ZNF79Q15937 498 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 ZNF124Q15973 351 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 SRSF7Q16629 238 aaKnown RBP eCLIP4.77□□□□□ -1.65
SSX3-201ENST00000298396 C6orf183Q5T699 404 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 OR52W1Q6IF63 320 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 C9orf139Q6ZV77 190 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 MOB1BQ7L9L4 216 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 HOGA1Q86XE5 327 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 SNX29P2Q8IUI4 249 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 ODF3L1Q8IXM7 274 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 PRR18Q8N4B5 295 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 ZNF565Q8N9K5 539 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 OR11H6Q8NGC7 330 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 OR10A7Q8NGE5 316 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 OR10V1Q8NGI7 309 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 OR52I2Q8NH67 350 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 SETD6Q8TBK2 473 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 C22orf15Q8WYQ4 148 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 S100A16Q96FQ6 103 aaKnown RBP4.77□□□□□ -1.65
SSX3-201ENST00000298396 C5orf30Q96GV9 206 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 SDHCQ99643 169 aaPredicted RBP4.77□□□□□ -1.65
SSX3-201ENST00000298396 SLC6A7Q99884 636 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 MMP27Q9H306 513 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 GAL3ST2Q9H3Q3 398 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 RIMS4Q9H426 269 aaPredicted RBP4.77□□□□□ -1.65
SSX3-201ENST00000298396 CHMP1AQ9HD42 196 aaPredicted RBP4.77□□□□□ -1.65
SSX3-201ENST00000298396 DIABLOQ9NR28 239 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 NUP50Q9UKX7 468 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 PSG11Q9UQ72 335 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 COL6A5A8TX70 2615 aa4.77□□□□□ -1.65
SSX3-201ENST00000298396 STAB1Q9NY15 2570 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 FBN1P35555 2871 aaKnown RBP4.76□□□□□ -1.65
SSX3-201ENST00000298396 TRBV6-7A0A0A0MS04 114 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 TRDCB7Z8K6 153 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 J3QR06 171 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 SDCBPO00560 298 aaPredicted RBP4.76□□□□□ -1.65
SSX3-201ENST00000298396 FABP7O15540 132 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 SPINT2O43291 252 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 SRD5A1P18405 259 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 PRSS3P35030 304 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 ETV6P41212 452 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 GNG10P50151 68 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 HTD2P86397 168 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 SRSF2Q01130 221 aaKnown RBP4.76□□□□□ -1.65
SSX3-201ENST00000298396 FAM189A2Q15884 450 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 HLA-DRB5Q30154 266 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 DEFB112Q30KQ8 113 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 MORN2Q502X0 79 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 RNASE12Q5GAN4 147 aaKnown RBP4.76□□□□□ -1.65
SSX3-201ENST00000298396 CT45A1Q5HYN5 189 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 NCR3LG1Q68D85 454 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 TRAT1Q6PIZ9 186 aa4.76□□□□□ -1.65
SSX3-201ENST00000298396 SLC25A48Q6ZT89 311 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms