RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 SCAMP5Q8TAC9 235 aa4.28□□□□□ -1.72
CSMD3-201ENST00000297405 ZNF480Q8WV37 535 aa4.28□□□□□ -1.72
CSMD3-201ENST00000297405 PARP12Q9H0J9 701 aaKnown RBP4.28□□□□□ -1.72
CSMD3-201ENST00000297405 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-201ENST00000297405 CD52P31358 61 aa4.28□□□□□ -1.72
CSMD3-201ENST00000297405 CDKN1BP46527 198 aa4.28□□□□□ -1.72
CSMD3-201ENST00000297405 RPL11P62913 178 aaKnown RBP4.28□□□□□ -1.72
CSMD3-201ENST00000297405 SSBP2P81877 361 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-201ENST00000297405 SLCO4C1Q6ZQN7 724 aa4.28□□□□□ -1.72
CSMD3-201ENST00000297405 OR9G1Q8NH87 305 aa4.28□□□□□ -1.72
CSMD3-201ENST00000297405 RNF167Q9H6Y7 350 aa4.28□□□□□ -1.72
CSMD3-201ENST00000297405 CD38P28907 300 aa4.28□□□□□ -1.72
CSMD3-201ENST00000297405 FCGR2BP31994 310 aaPredicted RBP4.28□□□□□ -1.72
CSMD3-201ENST00000297405 LSM6P62312 80 aaKnown RBP4.28□□□□□ -1.72
CSMD3-201ENST00000297405 LAMTOR1Q6IAA8 161 aa4.28□□□□□ -1.72
CSMD3-201ENST00000297405 Q6ZVL8 140 aa4.28□□□□□ -1.72
CSMD3-201ENST00000297405 ANKRD33Q7Z3H0 272 aa4.28□□□□□ -1.72
CSMD3-201ENST00000297405 GEMIN7Q9H840 131 aaKnown RBP4.28□□□□□ -1.72
CSMD3-201ENST00000297405 INSL6Q9Y581 213 aa4.28□□□□□ -1.72
CSMD3-201ENST00000297405 EPG5Q9HCE0 2579 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 TRBV24-1A0A075B6N3 115 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 H3BQ85 93 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF250P15622 560 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 SMIM8Q96KF7 97 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 GLIPR2Q9H4G4 154 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 SLAMF8Q9P0V8 285 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 HES2Q9Y543 173 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF865P0CJ78 1059 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-201ENST00000297405 SRD5A1P18405 259 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 GPR183P32249 361 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 FTSJ1Q9UET6 329 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 IGF2P01344 180 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 TMEM255AQ5JRV8 349 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 DACT2Q5SW24 774 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 PRSS45Q7RTY3 260 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 DRAM1Q8N682 238 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 OR10J6PQ8NGY7 276 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 SSBP3Q9BWW4 388 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-201ENST00000297405 TLNRD1Q9H1K6 362 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF860A6NHJ4 632 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 TSPAN2O60636 221 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 HOXA4Q00056 320 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-201ENST00000297405 RBPMS2Q6ZRY4 209 aaKnown RBP4.27□□□□□ -1.73
CSMD3-201ENST00000297405 NPWQ8N729 165 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 FASNP49327 2511 aaKnown RBP4.27□□□□□ -1.73
CSMD3-201ENST00000297405 FITM1A5D6W6 292 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 PGPEP1LA6NFU8 196 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 RNPS1Q15287 305 aaKnown RBP4.27□□□□□ -1.73
CSMD3-201ENST00000297405 KREMEN2Q8NCW0 462 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 OR4X1Q8NH49 305 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 UBE2FQ969M7 185 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 TMEM160Q9NX00 188 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 H3BML4 177 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 HMGN4O00479 90 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF195O14628 629 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 MNX1P50219 401 aaPredicted RBP4.27□□□□□ -1.73
CSMD3-201ENST00000297405 OR10D3Q8NH80 312 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 TMEM230Q96A57 120 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 SLC25A22Q9H936 323 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 A0A0D9SEW6 157 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 HOXB2P14652 356 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 SMPD1P17405 629 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 FOLR3P41439 243 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 SSR4P51571 173 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF141Q15928 474 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 HAPLN2Q9GZV7 340 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 ZFP64Q9NPA5 681 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 GOSR1O95249 250 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 SOX8P57073 446 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 AGERQ15109 404 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 KISS1Q15726 138 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 OSTM1Q86WC4 334 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 TNFRSF13CQ96RJ3 184 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 SPATA25Q9BR10 227 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 PBOV1Q9GZY1 135 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 PPP1R3EQ9H7J1 279 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 PRRT4C9JH25 899 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 TMEM238C9JI98 176 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 C10orf111Q8N326 155 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 OR1K1Q8NGR3 316 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 TMEM208Q9BTX3 173 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 RBMY1BA6NDE4 496 aaKnown RBP4.27□□□□□ -1.73
CSMD3-201ENST00000297405 RBMY1EA6NEQ0 496 aaKnown RBP4.27□□□□□ -1.73
CSMD3-201ENST00000297405 RBMY1DP0C7P1 496 aaKnown RBP4.27□□□□□ -1.73
CSMD3-201ENST00000297405 RBMY1A1P0DJD3 496 aaKnown RBP4.27□□□□□ -1.73
CSMD3-201ENST00000297405 RBMY1CP0DJD4 496 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 CXCL17Q6UXB2 119 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 AAED1Q7RTV5 226 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 TAAR2Q9P1P5 351 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 TRAV1-1A0A0B4J248 108 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 EML2O95834 649 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 ACYP1P07311 99 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 IFITM1P13164 125 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 PPICP45877 212 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 ATXN8Q156A1 80 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 OCIAD2Q56VL3 154 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 SAMD5Q5TGI4 173 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 SPRED2Q7Z698 418 aa4.27□□□□□ -1.73
CSMD3-201ENST00000297405 C5orf49A4QMS7 147 aa4.26□□□□□ -1.73
CSMD3-201ENST00000297405 ZNF785A8K8V0 405 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms