RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 CEP192Q8TEP8 1941 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 OR5B21A6NL26 309 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 C1QTNF9BB2RNN3 333 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 H0YIG0 161 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 ADAM20O43506 726 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 CHST1O43916 411 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 BMP5P22003 454 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 SNAI3Q3KNW1 292 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 ABHD12BQ7Z5M8 362 aaPredicted RBP13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 MBD3L1Q8WWY6 194 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 ZDHHC11Q9H8X9 412 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 FSCN3Q9NQT6 498 aa13.46□□□□□ -0.25
CTDSP1-201ENST00000273062 WDFY4Q6ZS81 3184 aa13.46□□□□□ -0.26
CTDSP1-201ENST00000273062 FRMD6-AS1P0C7T7 363 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 ZNF823P16415 610 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 EGR1P18146 543 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 ECI1P42126 302 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 ARL4DP49703 201 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 LCN2P80188 198 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 KCNIP4Q6PIL6 250 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 BRICD5Q6PL45 260 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 ANAPC16Q96DE5 110 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 NUDT22Q9BRQ3 303 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 MRPS17Q9Y2R5 130 aaKnown RBP13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 DUXBA0A1W2PPF3 345 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 PGPEP1LA6NFU8 196 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 WDR1O75083 606 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 PAX9P55771 341 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 RHOGP84095 191 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 SELENOKQ9Y6D0 94 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 FER1L5A0AVI2 2057 aa13.45□□□□□ -0.26
CTDSP1-201ENST00000273062 PPP1CBP62140 327 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 OR4A47Q6IF82 309 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 PRR27Q6MZM9 219 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 SARAFQ96BY9 339 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 MYO7BQ6PIF6 2116 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 OR2T8A6NH00 312 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 UTS2O95399 124 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 IGKV1D-33P01593 117 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 IGKV1-33P01594 117 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 MPLP40238 635 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 ZNF133P52736 654 aaPredicted RBP13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 ZP4Q12836 540 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 FNDC7Q5VTL7 733 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 OR4F5Q8NH21 305 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 ZNF721Q8TF20 911 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 SIGLEC12Q96PQ1 595 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 OR4F4Q96R69 305 aa13.44□□□□□ -0.26
CTDSP1-201ENST00000273062 IGKV3D-11A0A0A0MRZ8 115 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 BLACEA4D250 179 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 C5orf63A6NC05 138 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 SERPINE3A8MV23 424 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 NPIPA2E9PIF3 369 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 HS3ST1O14792 307 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 C1QTNF9P0C862 333 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 BAGE3Q86Y29 109 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 BAGE2Q86Y30 109 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 UEVLDQ8IX04 471 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 C20orf196Q8IYI0 205 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 ZNF295-AS1Q8N0V1 137 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 SPEM1Q8N4L4 309 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 RNF133Q8WVZ7 376 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 ZNF501Q96CX3 271 aaPredicted RBP13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 PLEKHJ1Q9NW61 149 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 ELOVL5Q9NYP7 299 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 TBL2Q9Y4P3 447 aaKnown RBP13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 IGHV3-20A0A0C4DH32 117 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 IGLC7A0M8Q6 106 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 OR6C6A6NF89 314 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 K7ESF4 209 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 CRISP2P16562 243 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 IL11P20809 199 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 NPPCP23582 126 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 MDH2P40926 338 aaKnown RBP13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 PSG4Q00888 419 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 NSDHLQ15738 373 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 ZNF468Q5VIY5 522 aaPredicted RBP13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 PRAMEF20Q5VT98 475 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 SLC38A9Q8NBW4 561 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 SMIM12Q96EX1 92 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 SLC35D1Q9NTN3 355 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 ZNF891A8MT65 544 aaPredicted RBP13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 IGKV3-11P04433 115 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 ESDP10768 282 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 SGMS2Q8NHU3 365 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 LHX4Q969G2 390 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 ADIPOR1Q96A54 375 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 LIN37Q96GY3 246 aaPredicted RBP13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 PRDM6Q9NQX0 595 aa13.43□□□□□ -0.26
CTDSP1-201ENST00000273062 CTXN2P0C2S0 81 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 GFRA1P56159 465 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 C16orf47Q6ZP98 133 aaPredicted RBP13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 ZNF114Q8NC26 417 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 OR4F17Q8NGA8 305 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 TXNIPQ9H3M7 391 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 IGHV1-69-2A0A0G2JMI3 117 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 DUX1O43812 170 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 TIAF1O95411 115 aa13.42□□□□□ -0.26
CTDSP1-201ENST00000273062 CLDN18P56856 261 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms