RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 F5H0A9 414 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 TAAR5O14804 337 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 IGLV2-23P01705 113 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 IGHG4P01861 327 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 CRYGBP07316 175 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 DRAM2Q6UX65 266 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 LINC00596Q86U02 117 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 FBXL14Q8N1E6 418 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 DAZAP1Q96EP5 407 aaKnown RBP4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 OR10C1Q96KK4 312 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 MMP26Q9NRE1 261 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF701Q9NV72 531 aaPredicted RBP4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 COMMD3Q9UBI1 195 aa4.58□□□□□ -1.68
TOPBP1-201ENST00000260810 RPP14O95059 124 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 IGHV3-13P01766 116 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 CD79AP11912 226 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 TPT1P13693 172 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 TAS2R45P59539 299 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 BPIFB3P59826 476 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 NAAAQ02083 359 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 CDNFQ49AH0 187 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 FAM209BQ5JX69 171 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 GRAMD2BQ96HH9 432 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 KIRREL1Q96J84 757 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 SMR3AQ99954 134 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 NDFIP1Q9BT67 221 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 TPSG1Q9NRR2 321 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 NECAP2Q9NVZ3 263 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 hCG_2014768A0A024R1R8 64 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 NPIPB11E5RHQ5 1161 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 INMT-MINDY4F8WBC2 141 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 CDC14BO60729 498 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 IFNA17P01571 189 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 BDKRB2P30411 391 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 CSN1S1P47710 185 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 PRKXP51817 358 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 BSPH1Q075Z2 132 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 ASAH1Q13510 395 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF266Q14584 549 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 OR8H1Q8NGG4 311 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF431Q8TF32 576 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 NEIL1Q96FI4 390 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 SLA2Q9H6Q3 261 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 ESRP2Q9H6T0 727 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 OBP2BQ9NPH6 170 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 FKBP11Q9NYL4 201 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 EXTL2Q9UBQ6 330 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 HSPB11Q9Y547 144 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 NRASP01111 189 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 IGLV1-47P01700 117 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 CD3DP04234 171 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 ACAA1P09110 424 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 HOXB1P14653 301 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 AGAP20933 346 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 NFYBP25208 207 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 CEACAM3P40198 252 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 POU3F4P49335 361 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 RAB7AP51149 207 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 LGALSLQ3ZCW2 172 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 PET117Q6UWS5 81 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 TCTE3Q8IZS6 198 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 OR6M1Q8NGM8 313 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 CD300LFQ8TDQ1 290 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 GLYATL2Q8WU03 294 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 PFDN5Q99471 154 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 WFDC1Q9HC57 220 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 RHBDL2Q9NX52 303 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 F5H5P2 479 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 HTR3BO95264 441 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 ACTL6AO96019 429 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 BCL3P20749 454 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 CCNOP22674 350 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 RAB5BP61020 215 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 SNRPD2P62316 118 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 PNLIPRP3Q17RR3 467 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 ATPAF1Q5TC12 328 aaPredicted RBP4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 ALKBH2Q6NS38 261 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 Q6ZS49 121 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 BPIFB2Q8N4F0 458 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 OR5D13Q8NGL4 314 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 OR4A16Q8NH70 328 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 LINC01560Q8TB33 94 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 ADTRPQ96IZ2 230 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 RBM24Q9BX46 236 aaKnown RBP4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 C20orf85Q9H1P6 137 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 OR1A1Q9P1Q5 309 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 MLXQ9UH92 298 aa4.57□□□□□ -1.68
TOPBP1-201ENST00000260810 SH2D1BO14796 132 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 FBP1P09467 338 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 WNT2P09544 360 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 MSR1P21757 451 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 VAMP1P23763 118 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 GATA4P43694 442 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 STK11Q15831 433 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 Q499Y3 187 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 BEND4Q6ZU67 534 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 FAM169BQ8N8A8 192 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 OR4C16Q8NGL9 310 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 OR1L6Q8NGR2 347 aa4.56□□□□□ -1.68
TOPBP1-201ENST00000260810 ZNF48Q96MX3 618 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms