RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 TRAT1Q6PIZ9 186 aa12.42□□□□□ -0.42
APOA1-201ENST00000236850 ZNF497Q6ZNH5 498 aa12.42□□□□□ -0.42
APOA1-201ENST00000236850 C16orf82Q7Z2V1 217 aa12.42□□□□□ -0.42
APOA1-201ENST00000236850 NUDCD2Q8WVJ2 157 aa12.42□□□□□ -0.42
APOA1-201ENST00000236850 CAPSLQ8WWF8 208 aa12.42□□□□□ -0.42
APOA1-201ENST00000236850 CITED1Q99966 193 aa12.42□□□□□ -0.42
APOA1-201ENST00000236850 CMSS1Q9BQ75 279 aaKnown RBP12.42□□□□□ -0.42
APOA1-201ENST00000236850 MMP28Q9H239 520 aa12.42□□□□□ -0.42
APOA1-201ENST00000236850 CHMP1AQ9HD42 196 aaPredicted RBP12.42□□□□□ -0.42
APOA1-201ENST00000236850 V9GYH0 126 aa12.42□□□□□ -0.42
APOA1-201ENST00000236850 TRAV39A0A0B4J263 110 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 FAM172BPA6NC97 362 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 MEIS3P1A6NDR6 274 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 SERPINE3A8MV23 424 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 BUB1B-PAK6H3BSN5 160 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 M0QZ24 198 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 MT-ND4P03905 459 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 GDNFP39905 211 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 MRPS15P82914 257 aaKnown RBP12.41□□□□□ -0.42
APOA1-201ENST00000236850 ARL6IP1Q15041 203 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 C6orf183Q5T699 404 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 HACD4Q5VWC8 232 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 BAIAP2L2Q6UXY1 529 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 OR52M1Q8NGK5 317 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 OR4K15Q8NH41 348 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 SETD6Q8TBK2 473 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 CCDC107Q8WV48 283 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 ARL11Q969Q4 196 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 RPEQ96AT9 228 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 ABHD1Q96SE0 405 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 PRSS22Q9GZN4 317 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.41□□□□□ -0.42
APOA1-201ENST00000236850 PKD1L1Q8TDX9 2849 aa12.41□□□□□ -0.42
APOA1-201ENST00000236850 J3QR06 171 aa12.4□□□□□ -0.42
APOA1-201ENST00000236850 SPINT2O43291 252 aa12.4□□□□□ -0.42
APOA1-201ENST00000236850 SSX5O60225 188 aa12.4□□□□□ -0.42
APOA1-201ENST00000236850 FCER2P06734 321 aa12.4□□□□□ -0.42
APOA1-201ENST00000236850 PRSS3P35030 304 aa12.4□□□□□ -0.42
APOA1-201ENST00000236850 PNLIPRP3Q17RR3 467 aa12.4□□□□□ -0.42
APOA1-201ENST00000236850 PYDC2Q56P42 97 aa12.4□□□□□ -0.42
APOA1-201ENST00000236850 TPTE2P1Q5T6R2 138 aa12.4□□□□□ -0.42
APOA1-201ENST00000236850 PYHIN1Q6K0P9 492 aa12.4□□□□□ -0.42
APOA1-201ENST00000236850 RFESDQ8TAC1 157 aa12.4□□□□□ -0.42
APOA1-201ENST00000236850 SOSTQ9BQB4 213 aa12.4□□□□□ -0.42
APOA1-201ENST00000236850 AKIP1Q9NQ31 210 aa12.4□□□□□ -0.42
APOA1-201ENST00000236850 TRAPPC2LQ9UL33 140 aa12.4□□□□□ -0.42
APOA1-201ENST00000236850 CHST1O43916 411 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 SSTR5P35346 364 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 ETV6P41212 452 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 PITPNAQ00169 270 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 ZNF79Q15937 498 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 Q3ZCU0 254 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 ZNF554Q86TJ5 538 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 MFSD4AQ8N468 514 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 OR10X1Q8NGY0 326 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 MRPL30Q8TCC3 161 aaKnown RBP12.39□□□□□ -0.43
APOA1-201ENST00000236850 MAFIPQ8WZ33 124 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 TOMM40LQ969M1 308 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 C12orf4Q9NQ89 552 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 KCNIP1Q9NZI2 227 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 ZNF230Q9UIE0 474 aaPredicted RBP12.39□□□□□ -0.43
APOA1-201ENST00000236850 PSG11Q9UQ72 335 aa12.39□□□□□ -0.43
APOA1-201ENST00000236850 LY6LH3BQJ8 138 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 PEX14O75381 377 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 FCGR3AP08637 254 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 FAM106CPP0CH98 169 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 RAB7AP51149 207 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 DGCR2P98153 550 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 LSAMPQ13449 338 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 LTC4SQ16873 150 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 ARSJQ5FYB0 599 aaPredicted RBP12.38□□□□□ -0.43
APOA1-201ENST00000236850 CCBE1Q6UXH8 406 aaPredicted RBP12.38□□□□□ -0.43
APOA1-201ENST00000236850 Q6ZPA2 131 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 LINC00299Q6ZSB3 139 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 TMEM219Q86XT9 240 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 OR8H3Q8N146 312 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 GAPTQ8N292 157 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 C8orf31Q8N9H6 132 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 OR52I2Q8NH67 350 aa12.38□□□□□ -0.43
APOA1-201ENST00000236850 C15orf65H3BRN8 121 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 M0QZK8 103 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 SDCBPO00560 298 aaPredicted RBP12.37□□□□□ -0.43
APOA1-201ENST00000236850 TPPPO94811 219 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 NAPSAO96009 420 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 LPLP06858 475 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 RCC1P18754 421 aaPredicted RBP12.37□□□□□ -0.43
APOA1-201ENST00000236850 IL3RAP26951 378 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 ZNF45Q02386 682 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 SRSF4Q08170 494 aaKnown RBP12.37□□□□□ -0.43
APOA1-201ENST00000236850 HERPUD1Q15011 391 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 TREML4Q6UXN2 200 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 C5orf24Q7Z6I8 188 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 THNSL2Q86YJ6 484 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 Q8N2B8 174 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 GVQW1Q8N7I0 195 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 UBALD1Q8TB05 177 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 C15orf40Q8WUR7 153 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 FCAMRQ8WWV6 532 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 S100ZQ8WXG8 99 aa12.37□□□□□ -0.43
APOA1-201ENST00000236850 TSC22D3Q99576 134 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms