RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 PIGBOS1A0A0B4J2F0 54 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 A0A0G2JRQ6 117 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 IGHV3-43DP0DP04 118 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 SELLP14151 372 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 GZMHP20718 246 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 CHRNB4P30926 498 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 NKX2-1P43699 371 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 P2RY1P47900 373 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 ID4P47928 161 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 AANATQ16613 207 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 ZNF585BQ52M93 769 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 THOC7Q6I9Y2 204 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 UNQ6494/PRO21346Q6UXR6 183 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 ZCCHC24Q8N2G6 241 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 PLPPR2Q96GM1 343 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 PRORYQ9H606 182 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 PLEKHF2Q9H8W4 249 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 DCAF16Q9NXF7 216 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 FBXL17Q9UF56 701 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 ATRXP46100 2492 aa14.35□□□□□ -0.11
RABGGTA-201ENST00000216840 ROS1P08922 2347 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 E7EQL1 145 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 GPR137BO60478 399 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 ZNF16P17020 682 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 TNFRSF1AP19438 455 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 TMEM33P57088 247 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 EIF4EBP1Q13541 118 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 CXorf66Q5JRM2 361 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 RPL7L1Q6DKI1 246 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 DEFB108BQ8NET1 73 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 GPR146Q96CH1 333 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 ABHD14BQ96IU4 210 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 NCOR2Q9Y618 2525 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 TANC2Q9HCD6 1990 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 A0A1B0GW55 424 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 RNF212BA8MTL3 300 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 VSTM5A8MXK1 200 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 DUX4L2P0CJ85 424 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 DUX4L3P0CJ86 424 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 DUX4L4P0CJ87 422 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 DUX4L5P0CJ88 424 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 DUX4L6P0CJ89 424 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 DUX4L7P0CJ90 424 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 IRF2P14316 349 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 TLE1Q04724 770 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 GPR157Q5UAW9 335 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 TEX36Q5VZQ5 186 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 DUX4L9Q6RFH8 374 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 NEUROG1Q92886 237 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 RNASE6Q93091 150 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 BSCL2Q96G97 398 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 GAFA1Q96PS6 74 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 NCOR1P1Q9H4R4 102 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 SDHAF2Q9NX18 166 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 DUX4Q9UBX2 424 aa14.34□□□□□ -0.11
RABGGTA-201ENST00000216840 CHD8Q9HCK8 2581 aa14.33□□□□□ -0.11
RABGGTA-201ENST00000216840 MFSD2BA6NFX1 497 aa14.33□□□□□ -0.12
RABGGTA-201ENST00000216840 DEFB108AA8MXU0 73 aa14.33□□□□□ -0.12
RABGGTA-201ENST00000216840 EDDM3BP56851 147 aa14.33□□□□□ -0.12
RABGGTA-201ENST00000216840 POLR2GP62487 172 aaKnown RBP eCLIP14.33□□□□□ -0.12
RABGGTA-201ENST00000216840 ADORA2A-AS1P86434 159 aa14.33□□□□□ -0.12
RABGGTA-201ENST00000216840 ID3Q02535 119 aa14.33□□□□□ -0.12
RABGGTA-201ENST00000216840 MSMO1Q15800 293 aa14.33□□□□□ -0.12
RABGGTA-201ENST00000216840 C14orf79Q96F83 325 aa14.33□□□□□ -0.12
RABGGTA-201ENST00000216840 PFDN2Q9UHV9 154 aa14.33□□□□□ -0.12
RABGGTA-201ENST00000216840 A0A1B0GU03 582 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 PITX3O75364 302 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 SLC25A6P12236 298 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 MUC1P15941 1255 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 TOR2AQ5JU69 321 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 CLEC9AQ6UXN8 241 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 ZNF808Q8N4W9 903 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 LINC01560Q8TB33 94 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 LSM10Q969L4 123 aaKnown RBP14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 CCL13Q99616 98 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 SMIM3Q9BZL3 60 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 IGKV1-5P01602 117 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 GYPAP02724 150 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 CGB3P0DN86 165 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 CGB7P0DN87 165 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 EPHA1P21709 976 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 GRNP28799 593 aaKnown RBP14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 LTC4SQ16873 150 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 FAM209AQ5JX71 171 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 ZNF788Q6ZQV5 615 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 TMED6Q8WW62 240 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 AGMATQ9BSE5 352 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 MAGT1Q9H0U3 335 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 ZNF665Q9H7R5 613 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 BARX1Q9HBU1 254 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 COQ3Q9NZJ6 369 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 OR6C3Q9NZP0 311 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 USF3Q68DE3 2245 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 ZZEF1O43149 2961 aa14.32□□□□□ -0.12
RABGGTA-201ENST00000216840 LRRC30A6NM36 301 aa14.31□□□□□ -0.12
RABGGTA-201ENST00000216840 I3L521 148 aa14.31□□□□□ -0.12
RABGGTA-201ENST00000216840 F2RL2O00254 374 aa14.31□□□□□ -0.12
RABGGTA-201ENST00000216840 SSSCA1O60232 199 aa14.31□□□□□ -0.12
RABGGTA-201ENST00000216840 GAPDHP04406 335 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms