RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Kntc1Q8C3Y4 2207 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Gm15056F6ZR08 88 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Emg1O35130 244 aaKnown RBP13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 BaxQ07813 192 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Mpzl1Q3TEW6 270 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Mfsd4b3Q3UN21 355 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Clpsl2Q3UW21 102 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr5Q60889 312 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr1233Q8VGN0 305 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Rep15Q9D7T1 230 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Klrc3Q9QXN7 221 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr193Q7TS43 309 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Pif1Q80SX8 650 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Tmem106cQ80VP8 260 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Lrtm2Q8BGX3 370 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Defb21Q8C5Z4 100 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Defb8Q91V82 60 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Arrdc1Q99KN1 434 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 AplfQ9D842 499 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Prss47A0A0N4SVQ0 395 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Ifna5P07349 189 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Slc39a7Q31125 476 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Samt2Q497M0 247 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 DbpQ60925 325 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 CybaQ61462 192 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Lgi3Q8K406 548 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Olfr830Q8VFJ5 315 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 MrgprdQ91ZB8 321 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 NtmQ99PJ0 344 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Gpx8Q9D7B7 209 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 GlceQ9EPS3 618 aa13.78□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Fndc10A2A9Q0 223 aa13.77□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Pwwp2bE9Q9M8 600 aa13.77□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Fabp9O08716 132 aa13.77□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Rab18P35293 206 aa13.77□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Pcbp4P57724 403 aaKnown RBP13.77□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Nkain2Q4PNJ2 208 aa13.77□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Ifna16Q810G1 189 aa13.77□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 IdnkQ8R0J8 184 aa13.77□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 SccpdhQ8R127 429 aa13.77□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Rita1Q9D1H0 253 aa13.77□□□□□ -0.2
Ccdc88b-201ENSMUST00000113440 Hsbp1l1B2RXB2 72 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Slc25a26Q5U680 274 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 DhhQ61488 396 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Slc22a27Q76M72 551 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Sh2d7Q8BI17 458 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Hif1anQ8BLR9 349 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Tssk5Q8C1R0 372 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Gm9817Q9D2M0 144 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Atg2bQ80XK6 2075 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Vmn1r91E9PZR7 307 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Psg20E9Q9B4 475 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 C3ar1O09047 477 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Klk1b1P00755 261 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Ms4a6dQ99N07 247 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Mrps24Q9CQV5 167 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Gkn3Q9D0T7 191 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 CutcQ9D8X1 272 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Cep295Q8BQ48 2412 aa13.77□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr872E9PVW2 323 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr750E9Q0Z1 331 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Trp53rkaQ5U452 244 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Fam169bQ8CHT6 337 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 SpartQ8R1X6 671 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Lrrc61Q8R2R5 259 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Tp53rkQ99PW4 244 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Acyp2P56375 106 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Rac1P63001 192 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Pax6P63015 422 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Cd84Q18PI6 329 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 G6pc3Q6NSQ9 346 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Il24Q925S4 181 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 EdarQ9R187 448 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Pira2F8VQ94 680 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Il9P15247 144 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr1279Q8VF38 313 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr1451Q8VFX5 310 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Poldip2Q91VA6 368 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Stard4Q99JV5 224 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Mrpl3Q99N95 348 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Dll4Q9JI71 686 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Dock6Q8VDR9 2080 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 R3hdmlA2A5I3 253 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Ogg1O08760 345 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Pcgf2P23798 342 aaKnown RBP13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Lhx4P53776 390 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Kcnj3P63250 501 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 F13bQ07968 669 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Slc35e3Q6PGC7 313 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Fbxw19Q8C2W8 466 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Vmn1r36Q8R2E3 305 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Cotl1Q9CQI6 142 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 B3GNT2Q9Z222 397 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Olfr122W4VSP0 330 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Mcm3apQ9WUU9 1971 aa13.76□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Slc6a9P28571 692 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Atf1P81269 269 aaKnown RBP13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 Trmt61aQ80XC2 290 aa13.75□□□□□ -0.21
Ccdc88b-201ENSMUST00000113440 MrgprgQ91ZB5 289 aa13.75□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 103 ms