RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Chrnb4Q8R493 495 aa11.72□□□□□ -0.53
Nup88-201ENSMUST00000035283 Olfr480Q8VEZ0 312 aa11.72□□□□□ -0.53
Nup88-201ENSMUST00000035283 Olfr508Q8VG42 310 aa11.72□□□□□ -0.53
Nup88-201ENSMUST00000035283 Olfr38Q8VGP4 317 aa11.72□□□□□ -0.53
Nup88-201ENSMUST00000035283 RabifQ91X96 123 aa11.72□□□□□ -0.53
Nup88-201ENSMUST00000035283 1810009J06RikQ9CPN7 247 aa11.72□□□□□ -0.53
Nup88-201ENSMUST00000035283 Tmem50aQ9CXL1 157 aa11.72□□□□□ -0.53
Nup88-201ENSMUST00000035283 Samd8Q9DA37 478 aa11.72□□□□□ -0.53
Nup88-201ENSMUST00000035283 Csnk1eQ9JMK2 416 aaKnown RBP11.72□□□□□ -0.53
Nup88-201ENSMUST00000035283 Ighv1-43A0A0A6YXN5 117 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Vmn1r129E9QA94 307 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Gm2075J3QMW5 144 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Gm8720K9J7F4 307 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Ifna1P01572 189 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Igkv7-33P01632 114 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Rps23P62267 143 aaKnown RBP11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Bahd1Q497V6 772 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Slc7a15Q50E62 488 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Slc22a27Q76M72 551 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 TxnipQ8BG60 397 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Zpld1Q8BGZ8 415 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Cd200r5Q8BTP3 270 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Adhfe1Q8R0N6 465 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Hsd17b13Q8VCR2 304 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Rbmxl1Q91VM5 388 aaKnown RBP11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 GhsrQ99P50 364 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Tmem100Q9CQG9 134 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Mrpl41Q9CQN7 135 aaKnown RBP11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Q9CQT9 129 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Pop4Q9CR08 221 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Ints12Q9D168 461 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Olfr710Q9EP55 310 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Tcf23Q9JLR5 209 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Neu3Q9JMH7 418 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Mageh1Q9NWG9 218 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Mmp24Q9R0S2 618 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Tagln2Q9WVA4 199 aaKnown RBP11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Ankdd1aA0A1L1ST07 508 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Fabp9O08716 132 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Dhrs3O88876 302 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 P01881 257 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Ifna9P09235 190 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Scd2P13011 358 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 AregP31955 248 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Clec3bP43025 202 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 P2ry1P49650 373 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 NptnP97300 397 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 OpalinQ7M750 143 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Pla2g3Q8BZT7 504 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Vmn1r178Q8R2B6 304 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Vmn1r8Q8R2C2 303 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Cela3bQ9CQ52 269 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 Vmn1r40Q9EQ46 310 aa11.71□□□□□ -0.53
Nup88-201ENSMUST00000035283 FryE9Q8I9 3020 aa11.71□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm7173A0A0G2JEB6 3132 aa11.71□□□□□ -0.54
Nup88-201ENSMUST00000035283 Zfp982A2A8Q4 368 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr231E9Q0M4 307 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm6526G3X9Q9 198 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Tdpoz1P0DMR5 365 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Hspb1P14602 209 aaKnown RBP11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Q3U6N9 222 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Grb2Q60631 217 aaKnown RBP11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Btn1a1Q62556 524 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Fbxo46Q8BG80 603 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Prss27Q8BJR6 328 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Mfsd9Q8C0T7 466 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm9837Q8C607 126 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Tmem234Q8R1E7 140 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Mrps28Q9CY16 186 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Myoz1Q9JK37 296 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Rad1Q9QWZ1 280 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Eif2s3xQ9Z0N1 472 aaKnown RBP11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Trav15d-1-dv6d-1A0A075B624 124 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Vmn1r138D3YTY2 306 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm8693E9PW18 306 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm4498K9J7G4 306 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Vmn1r118L7N273 306 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Bmi1P25916 324 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ly6dP35459 127 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gpm6aP35802 278 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Crisp3Q03402 241 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Psg19Q4KL31 475 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Lhfpl4Q5U4E0 247 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr1509Q7TQQ0 308 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr524Q7TRU0 318 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 9930022D16RikQ8BG27 128 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Stk17bQ8BG48 372 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Acsm5Q8BGA8 578 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Csnk1a1Q8BK63 337 aaKnown RBP11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Smim37Q8BT35 56 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Sdhaf4Q8BTE0 104 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Defb36Q8K3U4 67 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Wdr77Q99J09 342 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Slc25a22Q9D6M3 323 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Naa60Q9DBU2 242 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Slc37a2Q9WU81 501 aa11.7□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr1191-ps1A0A1L1STD5 311 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm43517E9PYS1 339 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm10260F6YVP7 152 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr1564K7N6V7 318 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 84.9 ms