RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 FREM1Q5H8C1 2179 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 ZNF732B4DXR9 585 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 LMO7DNF2Z398 122 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 PAGE4O60829 102 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 RAB4AP20338 218 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 MALLQ13021 153 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 MRPL30Q8TCC3 161 aaKnown RBP11.78□□□□□ -0.52
SCARB2-227ENST00000640957 SSC4DQ8WTU2 575 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 ZNF488Q96MN9 340 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 DEFB126Q9BYW3 111 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 LOC400499M0QZD8 3231 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 CNN1P51911 297 aaKnown RBP11.78□□□□□ -0.52
SCARB2-227ENST00000640957 RAB35Q15286 201 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 ASPHD1Q5U4P2 390 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 PLCXD3Q63HM9 321 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 OSR2Q8N2R0 312 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 SCRG1O75711 98 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 C1QTNF9P0C862 333 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 MDH2P40926 338 aaKnown RBP11.78□□□□□ -0.52
SCARB2-227ENST00000640957 SLC35B1P78383 322 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.78□□□□□ -0.52
SCARB2-227ENST00000640957 RPP25LQ8N5L8 163 aaKnown RBP11.78□□□□□ -0.52
SCARB2-227ENST00000640957 ZNF709Q8N972 641 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 RDH5Q92781 318 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 GPR146Q96CH1 333 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 OR4C12Q96R67 309 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 TM2D1Q9BX74 207 aa11.78□□□□□ -0.52
SCARB2-227ENST00000640957 SIRPB1O00241 398 aa11.77□□□□□ -0.52
SCARB2-227ENST00000640957 ZNF133P52736 654 aaPredicted RBP11.77□□□□□ -0.52
SCARB2-227ENST00000640957 HSPB9Q9BQS6 159 aa11.77□□□□□ -0.52
SCARB2-227ENST00000640957 MANBALQ9NQG1 85 aa11.77□□□□□ -0.52
SCARB2-227ENST00000640957 CISD1Q9NZ45 108 aaKnown RBP11.77□□□□□ -0.52
SCARB2-227ENST00000640957 EML6Q6ZMW3 1958 aa11.77□□□□□ -0.52
SCARB2-227ENST00000640957 B4DEV8 164 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 TIAF1O95411 115 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 SERPINE2P07093 398 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 B4GALT1P15291 398 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 KRTDAPP60985 99 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 MRPS11P82912 194 aaKnown RBP11.77□□□□□ -0.53
SCARB2-227ENST00000640957 CFHR1Q03591 330 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 C17orf67Q0P5P2 114 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 EIF3IQ13347 325 aaKnown RBP11.77□□□□□ -0.53
SCARB2-227ENST00000640957 RAET1LQ5VY80 246 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 CARFQ8N187 725 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 POC1BQ8TC44 478 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 ALKBH3Q96Q83 286 aaPredicted RBP11.77□□□□□ -0.53
SCARB2-227ENST00000640957 SMDT1Q9H4I9 107 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 ZNF703Q9H7S9 590 aaPredicted RBP11.77□□□□□ -0.53
SCARB2-227ENST00000640957 ALKBH4Q9NXW9 302 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 VAX2Q9UIW0 290 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 FER1L5A0AVI2 2057 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 RRP8O43159 456 aaKnown RBP11.77□□□□□ -0.53
SCARB2-227ENST00000640957 GYPAP02724 150 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 ABLIM2Q6H8Q1 611 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 SLC25A47Q6Q0C1 308 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 RNASEH2CQ8TDP1 164 aaKnown RBP11.77□□□□□ -0.53
SCARB2-227ENST00000640957 PSENENQ9NZ42 101 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 NAT8Q9UHE5 227 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 MTCH2Q9Y6C9 303 aa11.77□□□□□ -0.53
SCARB2-227ENST00000640957 CPAMD8Q8IZJ3 1885 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 CACNA1HO95180 2353 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 PIAS2O75928 621 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 NRASP01111 189 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 CBLN1P23435 193 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 IL3RAP26951 378 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 MEF2BQ02080 365 aaPredicted RBP11.76□□□□□ -0.53
SCARB2-227ENST00000640957 FAM189A2Q15884 450 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 KIAA1644Q3SXP7 199 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 GCSAMLQ5JQS6 135 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 C1orf194Q5T5A4 169 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 SYT13Q7L8C5 426 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.76□□□□□ -0.53
SCARB2-227ENST00000640957 GBGT1Q8N5D6 347 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 OR5P3Q8WZ94 311 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 EXTL1Q92935 676 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 MOB1AQ9H8S9 216 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 CDS2O95674 445 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 BRS3P32247 399 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 ECI1P42126 302 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 PNRC1Q12796 327 aaPredicted RBP11.76□□□□□ -0.53
SCARB2-227ENST00000640957 FAM53AQ6NSI3 398 aaPredicted RBP11.76□□□□□ -0.53
SCARB2-227ENST00000640957 H1FOOQ8IZA3 346 aaPredicted RBP11.76□□□□□ -0.53
SCARB2-227ENST00000640957 ZNF295-AS1Q8N0V1 137 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 ZNF501Q96CX3 271 aaPredicted RBP11.76□□□□□ -0.53
SCARB2-227ENST00000640957 OR2J1Q9GZK6 312 aa11.76□□□□□ -0.53
SCARB2-227ENST00000640957 SLC22A20A6NK97 555 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 CELA2AP08217 269 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 MPLP40238 635 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 HIST1H3AP68431 136 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 DCAF10Q5QP82 559 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 HAPLN4Q86UW8 402 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 ZNF114Q8NC26 417 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 TMEM170AQ8WVE7 144 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 BTF3L4Q96K17 158 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 C11orf1Q9H5F2 150 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 RNF114Q9Y508 228 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 ICE1Q9Y2F5 2266 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 ANKUB1A6NFN9 424 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 LILRA5A6NI73 299 aa11.75□□□□□ -0.53
SCARB2-227ENST00000640957 TCN2P20062 427 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms